Richard Bowman
e6ec800c21
Fixed camera settings
...
Since splitting the camera config into a separate YAML file, we've broken
the ability to change the camera's configuration via the API (or at any time
except when the camera is set up, I think). This (mostly) fixes that, though
I get type errors that I've had to work around (e.g. when setting
shutter_speed), see `pi.py`
2019-04-08 22:41:12 +01:00
Richard Bowman
e90eb7c2d4
deleted old autofocus plugin
2019-04-08 22:40:50 +01:00
Richard Bowman
7aea6291c7
Refactored fast autofocus
...
Tidied up the fast autofocus code, including moving the bulk of the
new code from the `scan` plugin into `autofocus` and updating it to
reflect the fact that the autofocus plugin now merges both old and
new functionality (i.e. fast_autofocus is no longer a separate
plugin). Also fixed a bug that caused it to overshoot on scans.
2019-04-08 19:56:29 +01:00
Richard Bowman
7e83d724b8
Added fast autofocus integrated with Z stacking in the scan code
2019-04-08 16:12:31 +01:00
Richard Bowman
1cf1e40c54
Added a lock to stop_preview for good measure
2019-04-08 14:06:14 +01:00
Richard Bowman
ec50d245ab
Added a lock to start_preview and caught errors
2019-04-08 14:05:29 +01:00
Joel Collins
24ded8de32
Restructured fast autofocus into main autofocus plugin
2019-04-08 15:09:36 +03:00
Joel Collins
edc5e7c241
Fixed malformed JSONIFY task responses
2019-04-08 08:10:57 +01:00
Joel Collins
10bafe1281
Replace missing configs with empty dictionary
2019-04-08 08:08:30 +01:00
Joel Collins
6e4e0fac54
Added fast_autofocus to defaults
2019-04-08 07:05:16 +00:00
Joel Collins
deae5d117a
Merge branch 'fast-autofocus' into 'master'
...
Added fast autofocus to default plugins
See merge request openflexure/openflexure-microscope-server!6
2019-04-08 06:57:47 +00:00
Richard Bowman
ef3aeb0581
Added fast autofocus
2019-04-07 19:58:08 +01:00
Richard Bowman
bb8312835a
Auto-calibrate now correctly freezes settings
2019-04-04 17:04:38 +01:00
Joel Collins
bff0db6463
Iterated to RC3
2019-04-01 10:36:34 +01:00
Joel Collins
f30d48e59d
Added brief wait before z-stack captures
2019-03-29 17:32:57 +00:00
Joel Collins
b5c0acb705
Improved scan argument parsing
2019-03-29 16:17:24 +00:00
Joel Collins
980e64397d
Improved scan metadata
2019-03-28 17:34:50 +00:00
Joel Collins
4602b1da9d
Testing not re-saving EXIF on exit
2019-03-28 14:45:51 +00:00
Joel Collins
6237762309
Combined stack and tile scans
2019-03-28 14:18:14 +00:00
Joel Collins
2cdc20b08e
Handle empty or malformed capture list
2019-03-28 14:18:01 +00:00
Joel Collins
ebce044fc2
Fixed issue 51
2019-03-28 11:47:56 +00:00
Joel Collins
a98158634c
Close the camera if the stage cannot be opened
2019-03-21 17:48:45 +00:00
Joel Collins
6b9a34437e
Allow serial exceptions to be raised
2019-03-21 17:48:34 +00:00
Joel Collins
b5e6a43caa
Spinkled in some sleeps to fix
...
#49
2019-03-21 15:48:22 +00:00
Joel Collins
dd4b0caf59
Fixed kwargs RST bug
2019-03-19 16:59:43 +00:00
Joel Collins
8a12d89ffc
Updated documentation for installation
2019-03-19 16:59:29 +00:00
Joel Collins
d445b359e9
Let gunicorn handle logging
2019-03-19 12:46:16 +00:00
Joel Collins
1bd3d0dacd
Iterated to RC2
2019-03-07 14:42:31 +00:00
Joel Collins
89ea6a69de
Fixed imports, and PEP8 styling
2019-03-07 10:58:08 +00:00
Joel Collins
298bc2ba6a
Added scan API routes
2019-03-07 09:54:43 +00:00
Joel Collins
d10263adf8
Added arg to affix metadata and tags to scans
2019-03-07 09:53:25 +00:00
Joel Collins
cd4bab94ab
Renamed stack plugin to scan
2019-03-06 21:08:56 +00:00
Joel Collins
4d82b4df8a
Initial tile/stack plugin
2019-03-06 17:04:32 +00:00
Joel Collins
e175bb1f92
Fixed broken plugin namespace
2019-03-06 17:04:18 +00:00
Joel Collins
2fe7722da6
Added subdirectory support for captures
2019-03-06 17:04:04 +00:00
Joel Collins
51ac8a0647
Disabled stream timeout by default
2019-02-26 13:53:33 +00:00
Joel Collins
f54250a638
Catch already-recording error when starting GPU preview
2019-02-25 18:15:16 +00:00
Joel Collins
6b3dca9f61
Fixed passing non-integers into preview window params
2019-02-25 14:23:08 +00:00
Joel Collins
951cfb6bb0
Fixed exception caused by applying invalid settings to picamera
2019-02-25 11:09:21 +00:00
Joel Collins
4b9aab0422
Iterated to RC 1
2019-02-22 15:47:27 +00:00
Joel Collins
b9bb89ce3f
Fixed HTTP exceptions not returning with correct HTTP status code
2019-02-20 13:26:21 +00:00
Joel Collins
3bf3b0f0c2
Fixed tag put route
2019-02-20 11:08:19 +00:00
Joel Collins
7d9f7278f1
Fixed camera config being overwritten instead of updated
2019-02-20 10:31:02 +00:00
Joel Collins
4f2cf79a26
Task route now returns a dictionary with task ID as key
2019-02-19 16:12:14 +00:00
Joel Collins
2e17b449dd
Merge branch 'master' of https://gitlab.com/openflexure/openflexure-microscope-server
2019-02-19 14:54:11 +00:00
Joel Collins
d8cd07cb21
Removed old recalibrate utility
2019-02-19 14:54:03 +00:00
Joel Collins
fe55957acb
Update README.md
2019-02-19 14:53:08 +00:00
Joel Collins
94b71c6c38
Add LICENSE
2019-02-19 14:51:33 +00:00
Joel Collins
8d782825fe
Iterated to beta 10
2019-02-19 13:42:31 +00:00
Joel Collins
eb4e979d1c
Updated tests
2019-02-19 13:42:25 +00:00
