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Author SHA1 Message Date
Julian Stirling
ca5c49289e Merge branch 'cchip' into 'v3' 
CChip scan workflow

See merge request openflexure/openflexure-microscope-server!474
 2026-03-12 18:16:52 +00:00
Joe Knapper
e5b0428740 Edit ofm_config_simulation.json 2026-03-12 17:05:15 +00:00
Joe Knapper
2675dff8dc Edit ofm_config_full.json 2026-03-12 17:04:48 +00:00
Joe Knapper
68c9f76fc0 Fix missing import 2026-03-12 16:11:41 +00:00
Joe Knapper
5ce77538d1 Fix tests now we dont do extra backlash moves 2026-03-12 14:53:55 +00:00
jaknapper
b43150c8bb Remove backlash correction from basic stack, as this is handled by move rel 2026-03-12 14:53:55 +00:00
Joe Knapper
ffb9a4d509 Add CChip workflow to scan_workflows 2026-03-12 14:53:55 +00:00
Julian Stirling
4190899f17 Merge branch 'move-to-dev-docs' into 'v3' 
Move more development information to the dev docs to minimise repitition and getting out of sync

Closes #556

See merge request openflexure/openflexure-microscope-server!529
 2026-03-11 14:43:48 +00:00
Julian Stirling
d3b1081c98 Further improve the linting and formatting section of the dev docs 2026-03-11 13:08:02 +00:00
Julian Stirling
b8878d6930 Removing out of date developer doc information and improving linking 2026-03-11 12:58:35 +00:00
Julian Stirling
59eafa7802 Apply suggestions from code review of branch move-to-dev-docs 
Co-authored-by: Joe Knapper <joe.knapper@glasgow.ac.uk>
 2026-03-11 12:38:18 +00:00
Joe Knapper
84b96809ad Merge branch 'seadragon-fix' into 'v3' 
Stop closing seadragon when going full screen

Closes #718

See merge request openflexure/openflexure-microscope-server!533
 2026-03-11 12:29:35 +00:00
Julian Stirling
36111f4da3 Merge branch 'stream-rder' into 'v3' 
Handle scan settings, then change stream, then pre-scan procedure when scanning

See merge request openflexure/openflexure-microscope-server!442
 2026-03-11 11:52:03 +00:00
Joe Knapper
2909194d61 Merge branch 'dynamic-ui' into 'v3' 
Increase number of UI elements that can be specified in the server

Closes #508 and #644

See merge request openflexure/openflexure-microscope-server!530
 2026-03-11 11:45:51 +00:00
Julian Stirling
842d18ecdf Apply suggestions from code review of branch dynamic-ui 
Co-authored-by: Joe Knapper <joe.knapper@glasgow.ac.uk>
 2026-03-11 11:00:33 +00:00
Joe Knapper
84f9fc9aa7 Consistent spacing around MD tests 2026-03-11 10:35:09 +00:00
Joe Knapper
2e1066477e Add parser.path to html sanitiser, fixing tests 2026-03-11 10:24:40 +00:00
Joe Knapper
fd0c0bd277 Add failing URL tests 2026-03-11 10:23:26 +00:00
Julian Stirling
3cb70278dd Remove the scan modal hide handler when unmounted 2026-03-11 09:37:58 +00:00
Julian Stirling
1090e693d4 Prevent scan modal closing on fullscreen close, and pin filter to fixed reference 2026-03-11 09:30:45 +00:00
Julian Stirling
c4d0c0e9da Explicit header, text and bullet blocks rather than one HTML block in ui spec 2026-03-10 15:25:37 +00:00
Julian Stirling
85ebfef44a Improve and test html sanitisation 2026-03-10 15:25:37 +00:00
Julian Stirling
0bfec5d046 Apply suggestions from code review of branch dynamic-ui 
Co-authored-by: Joe Knapper <joe.knapper@glasgow.ac.uk>
 2026-03-10 15:25:37 +00:00
Julian Stirling
88da4a18d9 Update unit tests 2026-03-10 15:25:37 +00:00
Julian Stirling
eccf26851e Reintroduce recactive button state for background detect 2026-03-10 15:25:37 +00:00
Julian Stirling
4da05b1869 Move background detect settings into SlideScan 2026-03-10 15:25:37 +00:00
Julian Stirling
bfef998300 Move more of scan workflow UI into the server 2026-03-10 15:25:37 +00:00
Julian Stirling
ca21ab03c6 Tidy up server specified interface 2026-03-10 15:25:37 +00:00
Julian Stirling
9f2cde2275 Implement recursive Interface in vue 2026-03-10 15:25:36 +00:00
Julian Stirling
a11f9b7f62 Start making a structure for general UI specification 2026-03-10 15:25:36 +00:00
Julian Stirling
68c057f890 Merge branch 'uncropped-checkbox' into 'v3' 
Remove uk-input from checkbox

See merge request openflexure/openflexure-microscope-server!535
 2026-03-10 13:36:44 +00:00
Joe Knapper
22999f7d52 Remove uk-input from checkbox 2026-03-10 12:12:55 +00:00
Joe Knapper
11d8c6d604 Stop closing seadragon when going full screen 2026-03-09 19:45:40 +00:00
Joe Knapper
2e99e4c4c2 Merge branch '523-improve-validation-checks' into 'v3' 
Improve Validation Checks

Closes #523

See merge request openflexure/openflexure-microscope-server!524
 2026-03-09 19:19:18 +00:00
Joe Knapper
b0c9223b04 Move pre_scan and switch stream as late as possible 2026-03-09 18:53:39 +00:00
Julian Stirling
85eefcc903 Merge branch 'spinners-dont-tab' into 'v3' 
Don't tab to spinners in webapp

Closes #717

See merge request openflexure/openflexure-microscope-server!531
 2026-03-09 17:41:35 +00:00
Joe Knapper
7532dfcfa3 Merge branch 'jaknapper-v3-patch-32977' into 'v3' 
Reorder Bug.md expected and actual behaviour with correct comments

See merge request openflexure/openflexure-microscope-server!532
 2026-03-09 17:23:25 +00:00
Joe Knapper
16e5e09133 Edit Bug.md 2026-03-09 17:03:10 +00:00
Joe Knapper
d5bc855114 Update prettier to use automatic line endings 2026-03-09 16:18:45 +00:00
Joe Knapper
a9fdb376fe Tab index -1 for spinners so we dont tab to them 2026-03-09 15:50:22 +00:00
Beth Probert
6d66dd0ed8 Change make_path_safe to is_path_safe and update tests to reflect this 2026-03-09 15:45:32 +00:00
Beth Probert
3776828699 Fix final typo 2026-03-09 14:52:23 +00:00
Beth Probert
ada7585706 Fix typos 2026-03-09 14:40:51 +00:00
Beth Probert
f50b3d5cfa Allow spaces in linux paths 2026-03-09 14:29:24 +00:00
Beth Probert
b1d47c8aae Add final test case for path checking 2026-03-09 14:09:00 +00:00
Beth Probert
968237bec0 Ruff checks 2026-03-09 14:02:15 +00:00
Beth Probert
fc437f529c Merge branch '523-improve-validation-checks' of https://gitlab.com/openflexure/openflexure-microscope-server into 523-improve-validation-checks 2026-03-09 13:54:45 +00:00
Beth Probert
f67699fbc8 Raise warnings if there are unsafe file path elements rather than coercing file paths. Stitching still raises an error if your file name is unsafe 2026-03-09 13:54:43 +00:00
Julian Stirling
4fe0341225 Merge branch '714-improve-bug-template' into 'v3' 
Update bug template to include table or configuration, more detail about how...

Closes #714

See merge request openflexure/openflexure-microscope-server!527
 2026-03-09 12:16:45 +00:00
Julian Stirling
3fee78a213 Tweak css of dev docs to remove spaces between code and adjacent text. 2026-03-08 18:30:17 +00:00