Richard Bowman
e73ee8875c
Fixed type annotations in autofocus and mock stage
...
I don't know why these didn't fail before - possibly because of
incomplete type information from old numpy...
I removed a few annotations because they were failing (e.g.
np.sum can return a scalar or an array), but I don't think
this should be a problem - the function inputs and return values
are still typed.
2021-03-30 17:51:00 +01:00
Richard Bowman
cd5e32b843
Removed deprecated np.float
...
numpy 1.20 deprecates np.float, which was only ever an alias for
``float``. I've replaced all occurrences of np.float with float, as
recommended. There should be no change in functionality.
2021-03-30 17:40:19 +01:00
Joel Collins
58b2967f53
Fixed autofocus 'PiCameraStreamer' object has no attribute 'annotate_text' error
2020-12-07 10:12:30 +00:00
Joel Collins
311366c943
Added type hints to CSM extension
2020-12-04 17:05:40 +00:00
Joel Collins
920354537a
Integrated CSMExtension
2020-12-04 16:05:39 +00:00
Joel Collins
7ba3f447e1
Added extra type hints
2020-12-04 15:23:03 +00:00
Joel Collins
63b633ba44
2.9 dev numpy types
2020-12-04 13:35:11 +00:00
Joel Collins
37f92b6cce
Linting fixes
2020-11-30 17:17:14 +00:00
Joel Collins
b8354d3e8e
Added type information to LABTHINGS_EXTENSIONS
2020-11-30 17:11:30 +00:00
Joel Collins
d28848412c
Fixed get_locations method reference
2020-11-30 16:59:56 +00:00
Joel Collins
18a0eedd5e
Fixed tile method reference
2020-11-30 16:57:54 +00:00
Joel Collins
8d0759e9e0
Updated default extensions to subclass structure
2020-11-30 16:41:39 +00:00
Joel Collins
7866ec0f47
Static type analysis
2020-11-30 13:36:45 +00:00
Joel Collins
b2192b2190
Fixed unused imports
2020-11-25 15:32:08 +00:00
Joel Collins
5137d1b9dc
Added basic unit tests of non-integrated functions
2020-11-25 15:25:17 +00:00
Joel Collins
3451b8a8a5
Added full TileScanArgs schema
2020-11-12 16:56:28 +00:00
Joel Collins
6fb61e1e3f
Reverted logging style
2020-11-12 15:45:58 +00:00
Joel Collins
9f5252194a
Updated all log strings to new format
2020-11-12 15:12:17 +00:00
Joel Collins
b350f62013
Removed old JSONResponse class
2020-11-12 13:50:48 +00:00
Joel Collins
da490fdfcd
Separated move_and_measure locks
2020-10-28 15:40:29 +00:00
Joel Collins
601e51d9b9
Code formatting
2020-10-26 14:58:09 +00:00
Joel Collins
ef4e825b9c
Merge branch 'temporary' into 'master'
...
Added a spiral scan option
See merge request openflexure/openflexure-microscope-server!75
2020-10-26 14:54:23 +00:00
Joel Collins
459a8dc2a3
Reset tracker frames after each mode
2020-10-26 13:36:36 +00:00
Joel Collins
574f4a615d
Fast AF use normal stream
2020-10-26 13:16:58 +00:00
Joel Collins
3c63d6a240
Overhauled autofocus tracker
2020-10-22 16:00:52 +01:00
Joel Collins
cd8145c198
Isort
2020-10-22 15:59:19 +01:00
Joel Collins
355b3cd8f2
Fixed argument parsing in PreferredLocationGUIView
2020-10-21 11:40:03 +01:00
Joel Collins
1677f0df76
Blackened
2020-10-19 18:34:58 +01:00
Joel Collins
4ae39db402
Revert scan to use old fast autofocus
2020-10-19 18:20:40 +01:00
Joel Collins
51ff132633
Refactored fast_autofocus
2020-10-19 18:17:29 +01:00
Joel Collins
2186bf7aaa
Add /updownup_autofocus view
2020-10-19 17:59:54 +01:00
Joel Collins
4ceb6bcafe
Separate "classic" fast AF from up-down-up AF
2020-10-19 17:59:07 +01:00
Joel Collins
9310deeeff
Fixed pylint line ignores
2020-10-16 09:35:41 +00:00
Joel Collins
994e83dbeb
Code cleanup
2020-10-14 14:56:29 +00:00
Joe Knapper
ad8fd54cb7
Added a spiral scan option
2020-10-14 15:52:44 +01:00
Joel Collins
2bfb988460
Code formatting
2020-10-13 15:02:19 +01:00
Joel Collins
345d497166
Fixed MoveAndMeasureAPI args schema
2020-09-30 16:27:28 +01:00
Joel Collins
1c0cc32b6c
Close #166
2020-09-30 13:25:36 +01:00
Joel Collins
317bde6371
Added MoveAndMeasureAPI view
2020-09-28 13:38:27 +01:00
Joel Collins
893e8e9357
Calibrate with greyworld AWB if available
2020-09-09 17:25:31 +01:00
Joel Collins
2ce58f2aee
Merge branch 'master' of https://gitlab.com/openflexure/openflexure-microscope-server
2020-09-07 16:33:01 +01:00
Joel Collins
54c342bbbb
Switch to picamerax
2020-09-07 16:31:59 +01:00
Joel Collins
5139b24ffe
Updated to new LabThings structure
2020-09-04 15:48:52 +01:00
Joel Collins
e110045dd3
Increased default_stop_timeout on TileScanAPI
2020-07-22 16:11:26 +01:00
Joel Collins
5c99da264f
Added posh stop to slow autofocus
2020-07-22 16:11:13 +01:00
Joel Collins
24398ba7dc
Updated tasks nomenclature
2020-07-21 12:54:42 +01:00
Joel Collins
54c5605cb1
Removed use of deprecated current_task_stopped
2020-07-21 11:57:33 +01:00
Joel Collins
4bf866b66b
Added fancy-stopping to scan task
2020-07-15 16:54:34 +01:00
Joel Collins
ab3c4b3745
Merge remote-tracking branch 'origin/master' into labthings-070
2020-07-03 18:13:20 +01:00
Joel Collins
6c0017be5a
Added metadata cache key
2020-07-01 15:35:31 +01:00
