Chish36
703e8293d5
Rom data is now saved to settings.json
2025-10-17 15:19:06 +01:00
Chish36
f7264441e1
Updated labthings dependencies
2025-10-17 15:19:06 +01:00
Chish36
38906c8fff
Moved quadratic function to utilities file
2025-10-17 15:19:05 +01:00
Chish36
d494761cbb
Updated docstrings and fixed ruff errors
2025-10-17 15:19:05 +01:00
Chish36
1c7527c2ef
Parisitic motion is now tracked with an exception
2025-10-17 15:19:05 +01:00
Chish36
23d53949b4
Small moves and medium moves are now in separate functions
2025-10-17 15:19:05 +01:00
Chish36
61c3877202
Removed the need for steps_generate function
2025-10-17 15:19:05 +01:00
Chish36
e74ac9d859
Improved docstrings and type hints.
2025-10-17 15:19:05 +01:00
Chish36
e327305549
Docstring added
2025-10-17 15:19:05 +01:00
Chish36
b90ecf8c49
Motion detection is now a function and a few other minor tweaks
2025-10-17 15:19:05 +01:00
Chish36
ada120db9c
Minor tweaks to z_pred and lowered tolerance for failure
2025-10-17 15:19:05 +01:00
Chish36
154870142d
Optional autofocus and other minor tweaks
2025-10-17 15:19:05 +01:00
Chish36
0bf3b4210a
Added stage measure to config list
2025-10-17 15:19:05 +01:00
Chish36
725f993366
Typehints and docstrings added
2025-10-17 15:19:05 +01:00
Chish36
0267251a18
Move and measure and z predict are now separate functions
2025-10-17 15:19:05 +01:00
Chish36
71e21d1e72
Step range and all other data is saved to stage_measure thing
2025-10-17 15:19:05 +01:00
Chish36
e0b086bdc8
Added parisitic motion detect, z prediction and saved results
2025-10-17 15:19:05 +01:00
Chish36
eb01aaf017
Completes all necessary movements along a single axis
2025-10-17 15:19:05 +01:00
Julian Stirling
3d3ca9ebcf
Merge branch 'log-lines' into 'v3'
...
Strip new lines when logging stitching
Closes #567
See merge request openflexure/openflexure-microscope-server!406
2025-10-17 13:17:49 +00:00
Joe Knapper
f23c8cd490
Merge branch 'fix-jitter' into 'v3'
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Fix jitter at specific screen sizes during scan
See merge request openflexure/openflexure-microscope-server!404
2025-10-10 14:14:34 +00:00
jaknapper
416830cbe8
Strip new lines when logging stitching
2025-10-10 12:27:09 +01:00
Julian Stirling
97fe2f357d
Merge branch 'bump-version-for-alpha3' into 'v3'
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Bump version for alpha3 and update changelog
See merge request openflexure/openflexure-microscope-server!405
2025-10-09 22:28:42 +00:00
Julian Stirling
96ffbb2b49
Bump version for alpha3 and update changelog
2025-10-09 19:55:42 +01:00
Julian Stirling
513a9e40bd
Merge branch 'document_simulation' into 'v3'
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Improve documentation for simulation server
Closes #517
See merge request openflexure/openflexure-microscope-server!390
2025-10-09 17:45:54 +00:00
Julian Stirling
c6bda196b1
Merge branch 'ce-disable' into 'v3'
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Ce disable
Closes #553
See merge request openflexure/openflexure-microscope-server!403
2025-10-09 17:45:49 +00:00
jaknapper
b58ddbf7d9
Update testing
2025-10-09 17:51:15 +01:00
Julian Stirling
4135532476
Apply suggestions from code review of branch ce-disable
2025-10-09 17:46:13 +01:00
Julian Stirling
46f3a8d5de
Fix jitter at specific screen sizes during scan
2025-10-09 17:00:45 +01:00
Chish36
38c991d232
Minor corrections applied
2025-10-09 15:53:57 +01:00
Chish36
e56a11ef66
Added more info on starting the simulation server and some basic instructions on simulating a scan
2025-10-09 15:51:26 +01:00
Joe Knapper
909de1709d
set ce_enable in tuning_utils
2025-10-09 15:36:01 +01:00
Julian Stirling
94541b2d4f
Merge branch 'stack-height-sanitise' into 'v3'
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Verify stack params at start of scan main loop
Closes #455
See merge request openflexure/openflexure-microscope-server!400
2025-10-09 14:00:59 +00:00
Joe Knapper
089beae01a
Tests for coercing stack params to valid values.
...
Co-authored with Julian Stirling
2025-10-09 14:26:01 +01:00
Joe Knapper
fa6fdb1a67
Stack parameter coercion in create_stack_params
...
Co-authored with Julian Stirling
2025-10-09 14:23:47 +01:00
Joe Knapper
33ff356f76
Apply suggestions from code review of branch stack-height-sanitise
...
Co-authored-by: Julian Stirling <julian@julianstirling.co.uk>
2025-10-09 14:22:48 +01:00
Richard Bowman
c89db72d0a
Don't coerce or log from validators.
...
Passing a logger in to the Model is hard: I've changed the
StackParams model so that it only validates, and raises a
ValueError if it's not correct.
Pydantic will turn the ValueError into a ValidationError.
2025-10-09 14:22:45 +01:00
Joe Knapper
05e0394485
StackParams as pydantic basemodel with validators
2025-10-09 14:22:42 +01:00
Joe Knapper
f90e716d8e
Stack limits as globals
2025-10-09 14:22:40 +01:00
jaknapper
18e49ba50c
Test stack params at start of scan main loop
2025-10-09 14:22:37 +01:00
Julian Stirling
6a2d69ed04
Merge branch 'primary-buttons' into 'v3'
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Clean up primary vs secondary buttons
Closes #554
See merge request openflexure/openflexure-microscope-server!402
2025-10-07 14:15:45 +00:00
Joe Knapper
dae5b816cc
Merge branch 'sample-size-sim' into 'v3'
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Simulate a rectangular sample
Closes #516
See merge request openflexure/openflexure-microscope-server!401
2025-10-07 10:09:37 +00:00
Julian Stirling
92b14265d1
Update picamera test results
2025-10-07 10:59:18 +01:00
Julian Stirling
7d794d1a22
Stop showing other picamera calibration buttons in calibration wizard
2025-10-07 10:52:06 +01:00
Joe Knapper
a34a9f99c5
Apply suggestions from code review of branch sample-size-sim
...
Co-authored-by: Julian Stirling <julian@julianstirling.co.uk>
2025-10-06 10:16:22 +00:00
jaknapper
a2facca43e
Clean up primary vs secondary buttons
2025-10-02 16:16:32 +01:00
Joe Knapper
2fc92fc1ff
Test sample and canvas size
2025-10-02 13:56:08 +01:00
Julian Stirling
4345f8c336
Merge branch 'tweak-scan-list' into 'v3'
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Scan list improvements
Closes #391
See merge request openflexure/openflexure-microscope-server!397
2025-09-29 08:55:13 +00:00
Joe Knapper
3812e9053a
Docstring fix
2025-09-26 17:16:55 +01:00
Joe Knapper
3deb5a4897
Merge branch 'cancel-scan-early-bugfix' into 'v3'
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Fix error trying to purge empty scans if current scan has no images
Closes #563
See merge request openflexure/openflexure-microscope-server!398
2025-09-26 09:33:21 +00:00
Joe Knapper
0a687e1678
Ruff
2025-09-25 18:51:33 +01:00
