Julian Stirling
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5e6aeb9bbf
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Move SangaboardThing into repo
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2025-07-02 16:42:38 +01:00 |
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Julian Stirling
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248f43d0fc
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Merge branch 'remove-test-thing' into 'v3'
Remove test Thing that is is never used.
See merge request openflexure/openflexure-microscope-server!310
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2025-07-02 15:02:07 +00:00 |
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Julian Stirling
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3fd1e46297
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Merge branch 'unique-len' into 'v3'
Combine uniquness and length checks
See merge request openflexure/openflexure-microscope-server!309
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2025-07-02 13:55:01 +00:00 |
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Julian Stirling
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ffd958f823
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Remove test Thing that is is never used.
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2025-07-02 14:33:23 +01:00 |
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Beth Probert
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e936dc2974
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Apply suggestions from code review of branch unique-len
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2025-07-02 13:12:10 +00:00 |
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Julian Stirling
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8a28a17461
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Combine uniquness and length checks
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2025-07-02 13:25:07 +01:00 |
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Julian Stirling
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35409ee490
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Merge branch 'download-stitched-image' into 'v3'
Allow downloading just the stitched image, and don't zip DZIs
Closes #441
See merge request openflexure/openflexure-microscope-server!305
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2025-07-02 10:21:23 +00:00 |
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Beth Probert
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f3a873ae58
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Apply suggestions from code review of branch download-stitched-image
Co-authored-by: Joe Knapper <joe.knapper@glasgow.ac.uk>
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2025-07-02 09:51:27 +00:00 |
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Julian Stirling
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2e18c2017a
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Apply suggestions from code review of branch download-stitched-image
Co-authored-by: Beth Probert <beth_probert@outlook.com>
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2025-07-02 09:39:33 +00:00 |
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Julian Stirling
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7295b86cf6
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Split up ScanDirectory._find_files into seperate functions
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2025-07-01 19:45:45 +01:00 |
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Julian Stirling
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254305a7a5
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Clarify whether name or path is returned in scan directory functions
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2025-07-01 19:21:56 +01:00 |
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Julian Stirling
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9b78b4620d
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Fix disabled HTML button and apply code review suggestions for branch download-stitched-image
Co-authored-by: Joe Knapper <joe.knapper@glasgow.ac.uk>
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2025-07-01 12:20:40 +01:00 |
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Julian Stirling
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75eac81b80
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rename css disabled property to make it button specific, adjust darkmode disabled css
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2025-07-01 11:16:25 +01:00 |
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Julian Stirling
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3671d52499
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Do not zip DZI files, or their associated tiles
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2025-07-01 09:04:14 +01:00 |
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Julian Stirling
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daf2cee481
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Add tests and correct stitch path
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2025-06-30 23:03:54 +01:00 |
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jaknapper
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ceefc83229
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Better checking of whether we can stitch
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2025-06-30 20:18:51 +01:00 |
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jaknapper
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987807ec3b
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Custom EndpointButton, Download logs using EndpointButton
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2025-06-30 20:18:51 +01:00 |
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jaknapper
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ff43deae36
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Download stitched image of scan (if present)
* Docstring for download stitch
* use global STITCH_SUFFIX
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2025-06-30 20:18:48 +01:00 |
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jaknapper
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62065dc385
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Add download stitch button to GUI
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2025-06-30 20:17:15 +01:00 |
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Julian Stirling
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31898122d7
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Merge branch 'webapp-package-fix' into 'v3'
Replace semi colon with double ampersand in package.json
See merge request openflexure/openflexure-microscope-server!308
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2025-06-30 17:31:02 +00:00 |
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Julian Stirling
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63ec8fd873
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Merge branch 'split-scan-dir-operations' into 'v3'
Trying to make a distinction between file directory operations for scans and scanning code
Closes #328
See merge request openflexure/openflexure-microscope-server!294
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2025-06-30 17:04:23 +00:00 |
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jaknapper
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687ef8a00e
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Replace semi colon with double ampersand, which is platform agnostic AND
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2025-06-30 17:57:16 +01:00 |
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Julian Stirling
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51f9df995d
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More changes suggested in review, generally docstring issues.
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2025-06-30 17:25:58 +01:00 |
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Julian Stirling
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ad838e8643
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Apply suggestions from code review of branch split-scan-dir-operations
Co-authored-by: Beth Probert <beth_probert@outlook.com>
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2025-06-30 17:25:58 +01:00 |
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Julian Stirling
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a6e48f8882
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Update webapp to accept scan time as timestamp not ISO 8601 datestring
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2025-06-29 23:17:17 +01:00 |
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Julian Stirling
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7f0745d772
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Add some more scan_directories tests
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2025-06-28 23:59:35 +01:00 |
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Julian Stirling
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7193ec34f5
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Starting to test more smart scan functionality using mocked Thing Dependencies
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2025-06-27 21:06:16 +01:00 |
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Julian Stirling
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3aa9b9100a
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Add a number of tests for scan directories and fix bugs
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2025-06-27 21:06:16 +01:00 |
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Julian Stirling
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1267d881b9
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Start writing tests for smart scan
Focusing on methods that don't start the whole scan.
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2025-06-27 21:06:16 +01:00 |
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Julian Stirling
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32f78a4cff
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Trying to make a distinction between file directory operations for scans and scanning code
This started as a small change and spiralled out of control it needs good unit tests and testing
before considering to merge
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2025-06-27 21:06:16 +01:00 |
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Julian Stirling
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0d2f324324
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Split creation of scan directory information into class with small testable methods
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2025-06-27 21:06:16 +01:00 |
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Julian Stirling
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3e0264bcbc
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Merge branch 'fast-stack' into 'v3'
A stack that tests whether the sharpest image is towards the middle
See merge request openflexure/openflexure-microscope-server!271
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2025-06-27 20:02:36 +00:00 |
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Julian Stirling
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8002600fcf
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Apply suggestions from code review of branch fast-stack
Co-authored-by: Joe Knapper <joe.knapper@glasgow.ac.uk>
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2025-06-27 16:40:18 +00:00 |
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Julian Stirling
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9a92fd478a
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Final docstring and testing updates based on code review
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2025-06-27 16:54:28 +01:00 |
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Julian Stirling
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46f3d21632
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Apply suggestions from code review of branch fast-stack
Co-authored-by: Beth Probert <beth_probert@outlook.com>
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2025-06-27 11:52:53 +01:00 |
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Julian Stirling
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fc6c13f40e
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Apply suggestions from code review of branch fast-stack
Co-authored-by: Beth Probert <beth_probert@outlook.com>
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2025-06-27 10:41:53 +00:00 |
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Julian Stirling
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73e54b802b
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Stop smart stack infinietly looping
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2025-06-27 01:29:26 +01:00 |
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Julian Stirling
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e90ff73499
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Move smart stack specific scan planning logic to SmartSpiral
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2025-06-27 01:08:55 +01:00 |
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Julian Stirling
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2ce2f998fa
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add tests for helper classes defined by fast stack
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2025-06-27 00:34:51 +01:00 |
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Julian Stirling
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05af5e7548
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Write unit teasts for CameraMemoryBuffer and fix minor issues found
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2025-06-26 22:49:09 +01:00 |
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Julian Stirling
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2aea6a2569
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Docstrings and stop using Pydantic for ScanParameters
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2025-06-26 19:46:25 +01:00 |
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Julian Stirling
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43d5f2fdfe
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Change capture_resolution to save resolution, because it is used for saving not capture
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2025-06-26 19:00:52 +01:00 |
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Julian Stirling
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6a87805b47
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Fixing a number of issues from the merge and refactor.
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2025-06-26 18:29:12 +01:00 |
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Julian Stirling
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61dd5e4958
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Compete first (untested) pass of trying to make fast stack compatible with new memory captures
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2025-06-26 17:43:11 +01:00 |
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Julian Stirling
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fda0a6e1ab
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Merge branch 'v3' into fast-stack, with conflict resolution but not fully
working yet
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2025-06-26 11:50:24 +01:00 |
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Joe Knapper
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378998d230
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Merge branch 'jpeg-capture-in-stacking' into 'v3'
2MP from 8MP capturing
Closes #364, #413, #298, #303, #288, #358, and #433
See merge request openflexure/openflexure-microscope-server!251
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2025-06-25 17:57:51 +00:00 |
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Joe Knapper
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b49aecb802
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Apply suggestions from code review of branch jpeg-capture-in-stacking
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2025-06-25 17:32:05 +00:00 |
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Julian Stirling
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761957d7fb
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Clarify exposure variables in docstring
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2025-06-25 17:53:43 +01:00 |
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Julian Stirling
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0389ab760a
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Apply suggestions from code review of branch jpeg-capture-in-stacking
Co-authored-by: Joe Knapper <joe.knapper@glasgow.ac.uk>
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2025-06-25 16:52:23 +00:00 |
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Julian Stirling
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ee8c58c99f
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Docstrings, typehints, and clarifications in PiCamera and its utils
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2025-06-25 17:36:11 +01:00 |
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