jaknapper
3420138e85
Mock updated api route
2026-05-12 16:11:03 +01:00
Julian Stirling
92619e2131
Merge branch 'calibration_thing' into 'v3'
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Calibrate settling times after moves
See merge request openflexure/openflexure-microscope-server!207
2026-05-11 12:32:30 +00:00
jaknapper
cc6866b2e5
Add tests for measure settling time
2026-05-11 12:49:52 +01:00
Julian Stirling
b6efb73cba
Fix data directory save location and mount path
2026-05-11 11:07:38 +01:00
Richard Bowman
9851485057
Update config and lifecycle test to use API prefix
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This adds an API prefix to the three config files, and updates the hard-coded URLs in the lifecycle test to use the new API root.
The change doesn't affect the unit or integration test suites, as neither of these set an API prefix.
Most of the required updates are likely to be in the web app, which I've not yet touched.
2026-05-11 11:07:38 +01:00
Joe Knapper
906b8be82c
Merge branch 'start-gallery-thing' into 'v3'
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Start implementing GalleryThing
See merge request openflexure/openflexure-microscope-server!576
2026-05-07 09:51:47 +00:00
Julian Stirling
c7bb3e3c11
Improve some attribute/method names
2026-05-07 09:48:49 +01:00
Julian Stirling
aeb337f9d1
Merge branch 'choose_int_downsample' into 'v3'
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Choose a correlation resize factor rounded to an int
See merge request openflexure/openflexure-microscope-server!541
2026-05-07 08:14:41 +00:00
Julian Stirling
1b69b19ec3
Apply suggestions from code review of branch start-gallery-thing
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Co-authored-by: Joe Knapper <joe.knapper@glasgow.ac.uk>
2026-05-07 08:04:41 +00:00
Julian Stirling
4583151345
Add runtime checkable protocol for checking gallery compatibility.
2026-05-06 14:42:44 +01:00
Julian Stirling
93d7d75b0d
Create basic gallery class that finds Things that want to show data
2026-05-06 10:05:34 +01:00
Julian Stirling
cc681a666c
Change shutdown command depending on OS versions
2026-04-30 14:48:35 +01:00
Julian Stirling
5b14f8d820
Add method for checking OS version.
2026-04-30 14:14:24 +01:00
Joe Knapper
924676ff5d
Merge branch 'stack-trends' into 'v3'
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Stack trends
Closes #752
See merge request openflexure/openflexure-microscope-server!564
2026-04-16 12:20:01 +00:00
Joe Knapper
4da8172a16
Updates from review, mark tests as allowed to fail
2026-04-16 11:49:04 +01:00
Beth Probert
fff965dab4
Fix side effects in mocking
2026-04-02 15:30:26 +01:00
Beth Probert
54b656952f
Remove mock call to replace with real call
2026-04-02 15:09:39 +01:00
Beth Probert
01954167ab
Merge branch 'v3' into labthings-debug-logging-config
2026-04-02 10:50:06 +01:00
jaknapper
1bb2a125bc
Update comment
2026-03-27 11:28:58 +00:00
jaknapper
96d67672d9
Choose a correlation resize factor rounded to an int
2026-03-27 11:28:58 +00:00
Joe Knapper
70c36333a8
Data path based on containing DIR location
2026-03-26 17:25:47 +00:00
Joe Knapper
5a2787a039
Data path based on containing DIR location
2026-03-26 17:25:33 +00:00
Joe Knapper
92e5541267
Add test that stack checking agrees with at least 80% of manual labels
2026-03-26 16:48:50 +00:00
Julian Stirling
4f86833393
Bump version numbers for alpha5 release.
2026-03-26 14:12:51 +00:00
Julian Stirling
5303664a4e
Fix tests
2026-03-24 16:31:04 +00:00
Joe Knapper
5ce77538d1
Fix tests now we dont do extra backlash moves
2026-03-12 14:53:55 +00:00
Julian Stirling
842d18ecdf
Apply suggestions from code review of branch dynamic-ui
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Co-authored-by: Joe Knapper <joe.knapper@glasgow.ac.uk>
2026-03-11 11:00:33 +00:00
Joe Knapper
84f9fc9aa7
Consistent spacing around MD tests
2026-03-11 10:35:09 +00:00
Joe Knapper
fd0c0bd277
Add failing URL tests
2026-03-11 10:23:26 +00:00
Julian Stirling
c4d0c0e9da
Explicit header, text and bullet blocks rather than one HTML block in ui spec
2026-03-10 15:25:37 +00:00
Julian Stirling
85ebfef44a
Improve and test html sanitisation
2026-03-10 15:25:37 +00:00
Julian Stirling
88da4a18d9
Update unit tests
2026-03-10 15:25:37 +00:00
Beth Probert
6d66dd0ed8
Change make_path_safe to is_path_safe and update tests to reflect this
2026-03-09 15:45:32 +00:00
Beth Probert
3776828699
Fix final typo
2026-03-09 14:52:23 +00:00
Beth Probert
ada7585706
Fix typos
2026-03-09 14:40:51 +00:00
Beth Probert
b1d47c8aae
Add final test case for path checking
2026-03-09 14:09:00 +00:00
Beth Probert
968237bec0
Ruff checks
2026-03-09 14:02:15 +00:00
Beth Probert
f67699fbc8
Raise warnings if there are unsafe file path elements rather than coercing file paths. Stitching still raises an error if your file name is unsafe
2026-03-09 13:54:43 +00:00
Beth Probert
349485d43b
Remove multi-underscores from allowed names
2026-03-06 15:52:50 +00:00
Beth Probert
2c2f97cb56
Force file names to be lower case to avoid Windows issues around case sensitivity when checking if a file already exists. Path names can be uppercase as these will be defined on a users system and pre-exist. Files are created by us so we can force sanitation
2026-03-06 15:37:01 +00:00
Beth Probert
35f7adcf07
Codespell
2026-03-06 14:16:42 +00:00
Beth Probert
4395d4001c
Allow relative imports with two dots at start of path. Update unit tests.
2026-03-06 14:13:00 +00:00
Beth Probert
e5429d6cda
Change make_path_safe to allow single dot relative imports, but no dots anywhere else. Added new unit tests for this.
2026-03-06 14:07:07 +00:00
Beth Probert
713df248ff
Add underscores to fix unit test
2026-03-06 09:53:41 +00:00
Beth Probert
7a17c92d3e
Apply suggestions from code review of branch 523-improve-validation-checks
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Co-authored-by: Julian Stirling <julian@julianstirling.co.uk>
2026-03-05 15:13:42 +00:00
Beth Probert
f52ce85b3e
Ruff formatting
2026-03-05 14:04:33 +00:00
Beth Probert
35efba19b8
Use pytest parametrize for better coverage of forbidden commands and reserved names
2026-03-05 13:55:05 +00:00
Beth Probert
fa9ea77812
Ruff check
2026-03-05 13:42:55 +00:00
Beth Probert
48f6e1b369
Allow python and python3 as stitching commands. They are allowed. Move stitching tests into one file
2026-03-05 13:35:21 +00:00
Beth Probert
98e71207c5
Add forbidden windows commands to stitching and utilities to check for file name sanitation. Unit tests also added
2026-03-05 13:03:17 +00:00
