rahix/openflexure-microscope-server
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Import openflexure-stitching from pip, updated toml and config jsons

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This commit is contained in:
jaknapper 2025-05-20 17:54:17 +01:00
parent 0b2aaa9c92
commit 576161e543
4 changed files with 4 additions and 3 deletions
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2
ofm_config_full.json
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@ -10,7 +10,7 @@
"/smart_scan/": { "/smart_scan/": {
"class": "openflexure_microscope_server.things.smart_scan:SmartScanThing", "class": "openflexure_microscope_server.things.smart_scan:SmartScanThing",
"kwargs": { "kwargs": {
"path_to_openflexure_stitch": "application/openflexure-stitching/.venv/bin/openflexure-stitch" "path_to_openflexure_stitch": "openflexure-stitch"
} }
}, },
"/background_detect/": "openflexure_microscope_server.things.background_detect:BackgroundDetectThing", "/background_detect/": "openflexure_microscope_server.things.background_detect:BackgroundDetectThing",

2
ofm_config_simulation.json
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@ -10,7 +10,7 @@
"/smart_scan/": { "/smart_scan/": {
"class": "openflexure_microscope_server.things.smart_scan:SmartScanThing", "class": "openflexure_microscope_server.things.smart_scan:SmartScanThing",
"kwargs": { "kwargs": {
"path_to_openflexure_stitch": "application/openflexure-stitching/.venv/bin/openflexure-stitch" "path_to_openflexure_stitch": "openflexure-stitch"
} }
}, },
"/background_detect/": "openflexure_microscope_server.things.smart_scan:BackgroundDetectThing", "/background_detect/": "openflexure_microscope_server.things.smart_scan:BackgroundDetectThing",

2
ofm_config_stub.json
View file

@ -10,7 +10,7 @@
"/smart_scan/": { "/smart_scan/": {
"class": "openflexure_microscope_server.things.smart_scan:SmartScanThing", "class": "openflexure_microscope_server.things.smart_scan:SmartScanThing",
"kwargs": { "kwargs": {
"path_to_openflexure_stitch": "application/openflexure-stitching/.venv/bin/openflexure-stitch" "path_to_openflexure_stitch": "openflexure-stitch"
} }
}, },
"/background_detect/": "openflexure_microscope_server.things.smart_scan:BackgroundDetectThing", "/background_detect/": "openflexure_microscope_server.things.smart_scan:BackgroundDetectThing",

1
pyproject.toml
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@ -19,6 +19,7 @@ dependencies = [
"labthings-sangaboard", "labthings-sangaboard",
"camera-stage-mapping ~= 0.1.10", "camera-stage-mapping ~= 0.1.10",
"opencv-python ~= 4.11.0", "opencv-python ~= 4.11.0",
"openflexure-stitching[libvips]==0.1.0",
"pillow ~= 10.4", "pillow ~= 10.4",
"anyio ~= 4.0", "anyio ~= 4.0",
"numpy ~= 2.2", "numpy ~= 2.2",