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A first pass of documentation describing the web app GUI. Screenshots are committed as LFS objects, I've been deliberately conservative here (only png files in the docs/ directory are LFSed) to avoid messing with any static files in the web app.
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Settings pane
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The settings for the microscope are gathered together into a settings pane, which is further subdivided into sections. This page does not provide an exhaustive list, but a few of the notable controls are:
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* Adjusting exposure time and gain of the camera, including automatic adjustment.
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* Automatic white balance and flat-field correction for the camera.
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* Enabling or disabling certain features of the software (e.g. ImJoy integration).
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* Enabling or disabling the video stream (this allows the native low-latency preview on the Raspberry Pi to be used instead).
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* Calibrating the relationship between stage coordinates and pixel coordinates in the video stream, allowing click-to-move to function.
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Important calibration tasks (in particular camera settings adjustment and click-to-move calibration) will be prompted in a "wizard" dialogue when the software is first run, to help first time users set up their microscope. All of the auto calibration routines are also available from the settings pane. |