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752 commits

Author SHA1 Message Date
Joe Knapper
e750129de2 Initial commit, splitting params into focus, capture, stack 2026-02-25 19:14:15 +00:00
jaknapper
2c532e11c8 Max_range cant be negative 2026-02-24 12:45:42 +00:00
Julian Stirling
fbdea68ab7 Capture logs when scanning 2026-02-23 11:35:03 +00:00
Julian Stirling
f5c907e62d Merge branch 'better-spellchecking' into 'v3' 
Add spellchecking for camelCase, PascalCase, and kebab-case

See merge request openflexure/openflexure-microscope-server!502
 2026-02-23 10:26:09 +00:00
Julian Stirling
66b4a06e87 Add spellchecking for camelCase, PascalCase, and kebab-case 2026-02-22 11:02:59 +00:00
Julian Stirling
19a6943d60 Use Invocation errors for expected errors. 2026-02-21 21:57:20 +00:00
Julian Stirling
484c7a757e Apply suggestions from code review of branch numerical-input-limits 
Co-authored-by: Joe Knapper <joe.knapper@glasgow.ac.uk>
 2026-02-19 15:36:44 +00:00
Julian Stirling
e66fe5a35a Add way to set spinner step without changing HTTP API 2026-02-19 13:35:14 +00:00
Julian Stirling
cd14f470f6 Use lt.property/setting validatiors to set numerical input range and step 2026-02-19 13:34:41 +00:00
Julian Stirling
eb21ca9aef Apply suggestions from code review of branch simulator-zoom 
Co-authored-by: Joe Knapper <joe.knapper@glasgow.ac.uk>
 2026-02-19 10:37:57 +00:00
Julian Stirling
80c78fbc5e Refactor image simulation for speed 2026-02-18 20:20:00 +00:00
Joe Knapper
94a9c2be8f Use options argument in UI for objective 2026-02-18 16:59:29 +00:00
Joe Knapper
01012f52a3 Crop canvas based on objective property 2026-02-18 16:59:27 +00:00
Julian Stirling
6f997cc990 Merge branch 'stage-setting-buttons' into 'v3' 
Add recentre and ROM test buttons to stage settings

Closes #502

See merge request openflexure/openflexure-microscope-server!482
 2026-02-18 16:46:20 +00:00
Joe Knapper
3f7de554d9 Merge branch 'jogging' into 'v3' 
Generalised Jogging

Closes #680

See merge request openflexure/openflexure-microscope-server!476
 2026-02-18 16:20:42 +00:00
Joe Knapper
a01813f053 Cleaner logging in stage-measure 2026-02-18 15:21:13 +00:00
Julian Stirling
f337bda289 Merge branch 'slow-dummy-z' into 'v3' 
Reduce the blur for a given z movement in simulation, to improve autofocus.

See merge request openflexure/openflexure-microscope-server!484
 2026-02-18 11:04:58 +00:00
Julian Stirling
ea3de5f45d Apply suggestions from code review of branch jogging 
Co-authored-by: Joe Knapper <joe.knapper@glasgow.ac.uk>
 2026-02-17 17:56:26 +00:00
jaknapper
143bbdfea1 Add URL to wiki if firmware out of date 2026-02-17 13:42:11 +00:00
Julian Stirling
56f68db5ca Move all dummy stage movement into a thread 2026-02-17 02:11:01 +00:00
Julian Stirling
752ef3a80c Reduce the blur for a given z movement in simulation, to improve autofocus. 2026-02-17 02:07:06 +00:00
Julian Stirling
96ff243239 Remove an method from BaseStage that is not hardware specific 2026-02-16 22:08:28 +00:00
Julian Stirling
8a77c09305 Add some basic tests for base stage implementation 2026-02-16 21:37:05 +00:00
Julian Stirling
10f73cfb76 Read Sangaboard step time from board 2026-02-16 17:47:25 +00:00
Julian Stirling
7ed718cbae Estimate move duraction added to each stage class 2026-02-16 17:31:40 +00:00
Julian Stirling
f4d11b3c83 Simplify JogCommand class structure, and remove unneeded event logic 2026-02-16 17:31:39 +00:00
Julian Stirling
eb79905581 Removed the received Event as waiting for forces every jog to be queued and dequeued 2026-02-16 17:31:39 +00:00
Julian Stirling
728880e49d Fix jog queue blocking waiting to put new commands. 2026-02-16 17:31:39 +00:00
Julian Stirling
f1d974c922 Improve some jogging docstrings 2026-02-16 17:31:39 +00:00
Julian Stirling
61666a116b Simulation jog 2026-02-16 17:13:27 +00:00
Julian Stirling
70dd7bd994 Generalise jog 2026-02-16 17:13:27 +00:00
Julian Stirling
2f205a35e9 Fix docstrings 2026-02-16 17:13:27 +00:00
Julian Stirling
5af8ad5192 Split jog dequing from calling commands 2026-02-16 17:13:27 +00:00
Richard Bowman
9ed850cc68 Switch move buttons to use jog 
This implements a nicer version of jogging, with a defined interval of 1/3 second. This can be tuned depending on what we think makes sense.

It might be good to re-use this for handling keypresses.
 2026-02-16 17:13:27 +00:00
Richard Bowman
abda60adf6 Prevent accidental queueing of jog commands 2026-02-16 17:12:17 +00:00
Richard Bowman
4d445396b2 Update position property during and after jog 2026-02-16 17:12:17 +00:00
Richard Bowman
04e7fa30bd Format fixes 2026-02-16 17:12:17 +00:00
Richard Bowman
3753341893 First working version of jog 
I've fixed a few issues, used the right exception for queue timeouts, and added a __repr__ to jog commands for nicer debug output.

This now works - it's not flawlessly smooth, but it's pretty close. The limiting factor seems to be the repeat rate of the keypresses in javascript.
 2026-02-16 16:50:10 +00:00
Richard Bowman
e9b4d73084 First implementation of interruptable jog moves. 
This introduces a new move command, "jog", which is a relative move that may be interrupted. The idea is that a client may send repeated requests to invoke "jog" actions, and each action replaces the previous one. This should mean that a continuous stream of "jog" requests results in continuous motion of the stage.

Motion may be stopped by cancelling an ongoing `jog` action, or by waiting for the move to complete.

My rationale for implementing it this way is that we have a built in fail-safe, because the stage will automatically stop after the current `jog` move completes, unless it gets another request. Using a short move (e.g. 0.5s) means it should never overrun by more than that.
 2026-02-16 16:50:10 +00:00
Joe Knapper
a027111022 Apply suggestions from code review of branch Extend-autofocus-in-scan 
Co-authored-by: Julian Stirling <julian@julianstirling.co.uk>
 2026-02-16 13:38:53 +00:00
Joe Knapper
03a8e2ab79 Increase dz range to 500 to 3000 2026-02-13 16:40:56 +00:00
Joe Knapper
704fc5569f Merge branch 'flash-led-sim' into 'v3' 
Illumination Thing

See merge request openflexure/openflexure-microscope-server!468
 2026-02-12 16:37:53 +00:00
Joe Knapper
bb5cce3d4e Only generate frame if LED is on 2026-02-12 13:54:12 +00:00
Joe Knapper
fdf33ce4a8 Apply suggestions from code review of branch flash-led-sim 
Co-authored-by: Julian Stirling <julian@julianstirling.co.uk>
 2026-02-12 13:48:12 +00:00
Julian Stirling
18477a663d Define flash in illumination base class 2026-02-12 13:40:20 +00:00
Julian Stirling
511b37176e Add clarifying docstring 2026-02-11 11:03:08 +00:00
Julian Stirling
5d5bae7f79 Apply suggestions from code review of branch More-workflow-layers 
Co-authored-by: Joe Knapper <joe.knapper@glasgow.ac.uk>
 2026-02-11 11:03:08 +00:00
Julian Stirling
9e477a26d8 Simplify planners a little to consolidate snake and raster 2026-02-11 10:39:30 +00:00
Joe Knapper
16458db85b Fix simulated imports 2026-02-11 10:26:04 +00:00
Joe Knapper
676d34842a Apply suggestions from code review of branch flash-led-sim 
Co-authored-by: Julian Stirling <julian@julianstirling.co.uk>
 2026-02-11 10:19:19 +00:00