Joe Knapper
d3aeb75ed9
Fixed centre typo
2025-09-25 12:52:17 +01:00
Joe Knapper
89214ea2ec
Add sphinx docstrings, add sprites in a way to test sizes match
2025-09-25 12:05:49 +01:00
Joe Knapper
49070d4163
Generated limited size sample of larger blobs, move faster in xy
2025-09-24 19:31:11 +01:00
Joe Knapper
afcb02bf7e
Increase density of blobs, limit range
2025-09-24 18:09:08 +01:00
Julian Stirling
6b1e40f689
Add flake8-simplicity rules
2025-09-18 16:21:45 +01:00
Julian Stirling
528c6a2b63
Add PyLint ruff checks
2025-09-18 16:21:45 +01:00
Julian Stirling
65f172d650
Stop using print statments or root level loggers
2025-09-18 16:21:45 +01:00
Julian Stirling
338d49f9e6
Remove remaining TODOs in favour of issues
2025-09-18 16:10:36 +01:00
Julian Stirling
ef89b536fc
Remove assert statements from production code
2025-09-18 16:10:36 +01:00
Julian Stirling
e89ad93535
Specify the camera board not the sensor model during configuration.
2025-09-18 13:00:46 +01:00
Julian Stirling
ca66234379
Apply suggestions from code review of branch reorganise-picamera-tuning-and-recal
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Co-authored-by: Joe Knapper <joe.knapper@glasgow.ac.uk>
2025-09-18 13:00:46 +01:00
Julian Stirling
f24272bc7f
Set sensor_model as kwarg to SteamingPicameraThing. From this load sensor information.
2025-09-18 13:00:46 +01:00
Julian Stirling
c16a0391df
Divide up tuning file modification from camera actions for recalibration.
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* Ensure that funtions only called locally by recalibrate utils are private
* Move public API to the top of the recalibrate utils file
* Move files that only alter the tuning dictionary to their own file
This makes the recalibration API used by PiCamera much more clearly defined, which
helps to plan out how to allow for different models.
2025-09-18 13:00:46 +01:00
jaknapper
5566125e6e
Update picamera file to HQ parameters
2025-09-18 13:00:46 +01:00
jaknapper
22e7ce4ef0
Change background detect to use lores stream for consistent stream even when scanning.
2025-09-17 17:02:23 +01:00
Julian Stirling
8500b479f5
No Never returns from actions in base Thing classes
2025-08-28 09:13:44 +01:00
Julian Stirling
8f78369aaf
fixup! Add ANN20X rules to ruff
2025-08-27 18:56:19 +01:00
Julian Stirling
2ce49088e7
Add return typehints to magic methods
2025-08-27 18:56:09 +01:00
Julian Stirling
4c46330959
Add ANN20X rules to ruff
2025-08-27 18:56:08 +01:00
Julian Stirling
d673196671
Add ANN002, and ANN003 rules
2025-08-27 18:54:16 +01:00
Julian Stirling
24233412af
Start adding ANN ruff rules
2025-08-27 18:54:15 +01:00
Julian Stirling
b46f429c1f
Apply suggestions from code review of branch unify-jpeg-capture
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Co-authored-by: Richard Bowman <richard.bowman@cantab.net>
2025-08-27 17:30:51 +01:00
Julian Stirling
5bb742881f
Fix typehints and docs for opencv camera
2025-08-27 17:30:51 +01:00
Julian Stirling
b124355fed
Fix capture array for raw stream
2025-08-27 17:14:49 +01:00
Julian Stirling
7cd6b11411
Further unification of camera array functionality
2025-08-27 17:14:49 +01:00
Julian Stirling
5484b51a1e
Unify JPEG capture, metadata, and saving; reducing duplication
2025-08-27 17:14:49 +01:00
Julian Stirling
4450fda945
Merge branch 'simulation_wrap' into 'v3'
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Make simulation image wrap to prevent errors when moving out of range.
Closes #513
See merge request openflexure/openflexure-microscope-server!380
2025-08-27 16:13:24 +00:00
Julian Stirling
5515d55e6d
Merge branch 'error-types' into 'v3'
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Tweak a few error types.
Closes #320
See merge request openflexure/openflexure-microscope-server!376
2025-08-27 13:47:26 +00:00
Julian Stirling
c31fffad5b
Make simulation image wrap to prevent errors when moving out of range.
2025-08-26 16:03:56 +01:00
Julian Stirling
9257c4489e
Apply suggestions from code review of branch prevent-broken-frames-ending-scans
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Co-authored-by: Beth Probert <beth_probert@outlook.com>
2025-08-21 18:05:46 +01:00
Julian Stirling
dade26cde1
Tweak a few error types.
2025-08-21 16:11:30 +01:00
Julian Stirling
6fa4e4dc64
Add a grab_as_array camera method that grabs from the stream but catches broken jpegs and retries
2025-08-21 13:35:21 +01:00
Julian Stirling
0a9b6be9bd
Raise error if tuning algorithm cannot be returned, unless explicityly asked not to
2025-08-21 12:44:57 +01:00
Julian Stirling
fdae0b9226
Add get_tuning_algo method to StreamingPiCamera2
2025-08-20 14:53:53 +01:00
Julian Stirling
ab0bece70b
Deepcopy default tuning file so it isn't affected by calibration.
2025-08-20 14:51:19 +01:00
Joe Knapper
c2980dc988
Merge branch 'typehint-autofocus' into 'v3'
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Typehints and better variable names for autofocus
Closes #271
See merge request openflexure/openflexure-microscope-server!367
2025-08-15 10:30:36 +00:00
Joe Knapper
f383365cf7
Apply suggestions from code review of branch typehint-autofocus
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Co-authored-by: Julian Stirling <julian@julianstirling.co.uk>
2025-08-15 10:30:29 +00:00
Joe Knapper
bd115e0023
Change all CameraDeps to CameraClients
2025-08-15 10:16:36 +00:00
Joe Knapper
504b81fef6
Typehints and better variable names for autofocus
2025-08-14 14:51:03 +01:00
Julian Stirling
af93db7de8
Merge branch 'let-preview-stitch-cancel' into 'v3'
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Allow preview to cancel!
See merge request openflexure/openflexure-microscope-server!359
2025-08-13 15:18:13 +00:00
Julian Stirling
05644456e0
Allow preview to cancel!
2025-08-12 16:41:55 +01:00
Julian Stirling
6142a267db
Add flake8 bugbear checks
2025-08-12 13:09:43 +01:00
Julian Stirling
cd311f08bf
Update stiching to differentiate bwtween stitchers that use a thread and those that block
2025-08-06 17:47:33 +01:00
Julian Stirling
5f092835ac
Apply suggestions from code review of branch yet-another-smart-scan-refactor
2025-08-06 17:27:26 +01:00
Julian Stirling
2e6ba73345
Apply suggestions from code review of branch yet-another-smart-scan-refactor
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Co-authored-by: Joe Knapper <joe.knapper@glasgow.ac.uk>
2025-08-06 17:27:26 +01:00
Julian Stirling
f9fcdf628b
Squash final todos for SmartScan refactor
2025-08-06 17:27:26 +01:00
Julian Stirling
7d83aadf8d
Squash some TODOs
2025-08-06 17:27:26 +01:00
Julian Stirling
4e9b07c78f
Consolidate information into ScanData, remove ad-hoc differences for specific error in _run_scan
2025-08-06 17:27:26 +01:00
Julian Stirling
82691a6b78
Tweak error reporting in _run_scan and add a lot more testing for _run_scan
2025-08-06 17:27:26 +01:00
Julian Stirling
d7a7ac4c7d
More complete testing of code that runs stitching subprocess.
2025-08-06 17:27:26 +01:00
