rahix/openflexure-microscope-server
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55 commits

Author SHA1 Message Date
Julian Stirling
cde6d0c9b3 Save settings when detector settings updated 2025-07-31 21:10:52 +01:00
Julian Stirling
33413a591a Complete UI for arbitrary dectector settings. Required better method for invoking actions. 
Error handling was fixed in the process of getting the above correct.
 2025-07-31 20:56:55 +01:00
Julian Stirling
e7e3a08210 Camera settings exposed in UI defined by server. 2025-07-31 20:56:55 +01:00
Julian Stirling
0794d4777f Camera calibration buttons specified by server. Simulation has option to remove sample 2025-07-31 20:56:55 +01:00
Julian Stirling
b90b02cf7d Better fix for exposure drift with more complete testing. Also fix return value for capture_to_memory 2025-07-29 12:11:45 +01:00
Julian Stirling
238d022342 Apply suggestions from code review of branch bg_detect_in_camera 
Co-authored-by: Beth Probert <beth_probert@outlook.com>
 2025-07-26 16:45:06 +01:00
Julian Stirling
eed3c44804 Get new background detect running in simulation mode. 2025-07-24 17:08:39 +01:00
Julian Stirling
fe1b84a922 Complete first pass (untested on hardware) of bg detect refactor. 2025-07-24 17:07:50 +01:00
Julian Stirling
2245d9357d Continue to rebase background detect. 2025-07-24 17:07:50 +01:00
Julian Stirling
b5586a4b32 A partial refactor of background detect 2025-07-24 17:07:50 +01:00
Julian Stirling
59a5246904 Apply suggestions from code review of branch simplify-csm-interface 
Co-authored-by: Joe Knapper <joe.knapper@glasgow.ac.uk>
 2025-07-14 15:33:50 +00:00
Julian Stirling
b89449be77 Add camera-stage-mapping compliant functions to BaseStage and BaseCamera. 2025-07-13 21:55:55 +01:00
Julian Stirling
7e6017f648 Get codespell passing and add it as a CI job. 2025-07-11 00:16:25 +01:00
Julian Stirling
e33fecaef0 Documentation of python magic class methods 2025-07-10 16:46:10 +01:00
Julian Stirling
1bbbfeef0f Add docstrings to public methods 2025-07-10 14:04:48 +01:00
Julian Stirling
a30b726b91 Class docstrings 2025-07-10 13:27:41 +01:00
Julian Stirling
80beeea07b Add punctuation to docstrings 2025-07-10 09:24:50 +01:00
Julian Stirling
4dc41bb008 Single line summaries of docstrings 2025-07-10 09:24:49 +01:00
Julian Stirling
35d47fe3ed Starting docstring on the same lines as the quotations 2025-07-10 09:24:49 +01:00
Julian Stirling
f51dae7b3a Doc strings to imperative mood 2025-07-10 09:24:49 +01:00
Julian Stirling
a84a916719 Restructured text fixes so that pydoctor would return without an error 2025-07-09 23:59:08 +01:00
Julian Stirling
d9fd54696a Monkey patch Uvicorn's handle_exit function to stop streams 
Before the uvicorn handle_exit function is called kill the camera
streams.
 2025-07-09 16:53:08 +01:00
Julian Stirling
52a80ef66b And adjust for new as lt import 2025-07-07 15:25:14 +01:00
Julian Stirling
fc6c13f40e Apply suggestions from code review of branch fast-stack 
Co-authored-by: Beth Probert <beth_probert@outlook.com>
 2025-06-27 10:41:53 +00:00
Julian Stirling
05af5e7548 Write unit teasts for CameraMemoryBuffer and fix minor issues found 2025-06-26 22:49:09 +01:00
Julian Stirling
2aea6a2569 Docstrings and stop using Pydantic for ScanParameters 2025-06-26 19:46:25 +01:00
Julian Stirling
6a87805b47 Fixing a number of issues from the merge and refactor. 2025-06-26 18:29:12 +01:00
Julian Stirling
61dd5e4958 Compete first (untested) pass of trying to make fast stack compatible with new memory captures 2025-06-26 17:43:11 +01:00
Julian Stirling
0389ab760a Apply suggestions from code review of branch jpeg-capture-in-stacking 
Co-authored-by: Joe Knapper <joe.knapper@glasgow.ac.uk>
 2025-06-25 16:52:23 +00:00
Julian Stirling
83e0e08ccc Apply suggestions from code review of branch jpeg-capture-in-stacking 
Co-authored-by: Beth Probert <beth_probert@outlook.com>
 2025-06-25 15:12:28 +00:00
Julian Stirling
ce5b5b781c Add typehints and docstrings as suggested in review 2025-06-25 15:55:48 +01:00
Julian Stirling
0933ece63a Apply suggestions from code review of branch jpeg-capture-in-stacking 
Co-authored-by: Beth Probert <beth_probert@outlook.com>
 2025-06-25 15:39:36 +01:00
Julian Stirling
8a4ad49c03 Apply suggestions from code review of branch jpeg-capture-in-stacking 
Co-authored-by: Richard Bowman <richard.bowman@cantab.net>
 2025-06-25 09:17:32 +00:00
Julian Stirling
0e3f4305b5 Tidy post refactor of cameras 2025-06-23 11:26:24 +01:00
Julian Stirling
4368dc3d90 Consolidate functionality into BaseCamera from Capture Thing and StreamingPicamera2 2025-06-23 11:26:22 +01:00
Julian Stirling
b5606984ae Consolidate the BaseCamera, CameraStub, and CameraProtocol, move StreamingPiCamera2 to this repo 2025-06-23 11:25:49 +01:00
jaknapper
7052917ff9 capture_image in stub raises NotImplemented 2025-06-23 11:25:49 +01:00
jaknapper
8c8c6568c3 Updated docstring for start_streaming 2025-06-23 11:25:49 +01:00
jaknapper
2d946637eb Added buffer_count as an argument of streaming 2025-06-23 11:25:48 +01:00
jaknapper
968bd339c2 SETTLING_TIME global in stacking 2025-06-23 11:25:37 +01:00
jaknapper
744ec28f93 Get images as a PIL image from camera, use resizing and saving as settling time in stack 2025-06-23 11:19:20 +01:00
jaknapper
9f2a131f1e Swap stream for scan, target_resolution as arg 2025-06-23 11:17:46 +01:00
jaknapper
f5c1ff2621 Ruff formating 2025-06-23 11:17:46 +01:00
jaknapper
17f3bbe646 Low res stream during scanning for instant high res captures 2025-06-23 11:17:46 +01:00
jaknapper
a9fdd0ea3e Wait params in captures, multiple attempts to capture 2025-06-23 11:17:46 +01:00
jaknapper
8bc0573ab1 Capture_array can now use "full" stream 2025-06-23 11:17:46 +01:00
jaknapper
9d1385231d Rename jpeg_array to highres_array 2025-06-23 11:17:46 +01:00
jaknapper
26163dc97e Added a new way to capture full res JPEGs, need to do a comparison of results 2025-06-23 11:17:45 +01:00
jaknapper
a4801ad861 Update camera thing to match upstream 2025-05-07 19:52:21 +01:00
Richard Bowman
9fd8fc37f1 Formatted with Ruff 2024-12-03 06:46:08 +00:00