rahix/openflexure-microscope-server
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232 commits

Author SHA1 Message Date
jaknapper
b211cfd4c5 Validate and test stack inputs 
Update picamera hardware test
 2026-02-25 19:15:56 +00:00
Joe Knapper
37e3450670 Move CaptureParams into camera from autofocus 2026-02-25 19:14:15 +00:00
Julian Stirling
eb21ca9aef Apply suggestions from code review of branch simulator-zoom 
Co-authored-by: Joe Knapper <joe.knapper@glasgow.ac.uk>
 2026-02-19 10:37:57 +00:00
Julian Stirling
80c78fbc5e Refactor image simulation for speed 2026-02-18 20:20:00 +00:00
Joe Knapper
94a9c2be8f Use options argument in UI for objective 2026-02-18 16:59:29 +00:00
Joe Knapper
01012f52a3 Crop canvas based on objective property 2026-02-18 16:59:27 +00:00
Julian Stirling
752ef3a80c Reduce the blur for a given z movement in simulation, to improve autofocus. 2026-02-17 02:07:06 +00:00
Joe Knapper
bb5cce3d4e Only generate frame if LED is on 2026-02-12 13:54:12 +00:00
Joe Knapper
fdf33ce4a8 Apply suggestions from code review of branch flash-led-sim 
Co-authored-by: Julian Stirling <julian@julianstirling.co.uk>
 2026-02-12 13:48:12 +00:00
Joe Knapper
16458db85b Fix simulated imports 2026-02-11 10:26:04 +00:00
Joe Knapper
676d34842a Apply suggestions from code review of branch flash-led-sim 
Co-authored-by: Julian Stirling <julian@julianstirling.co.uk>
 2026-02-11 10:19:19 +00:00
Joe Knapper
4d788a2817 Remove flash from stage baseclass, add to sim config 2026-02-10 22:19:49 +00:00
jaknapper
5682b4d28d Illumination Things for sangaboard and simulator 2026-02-10 18:42:59 +00:00
Joe Knapper
1de4366df7 Flash LED endpoint in simulator for parity 2026-02-10 15:59:18 +00:00
Julian Stirling
b26dda60a4 More tests and assoicated bugfixes 2026-01-18 23:19:44 +01:00
Julian Stirling
ca46439269 Rename "active_detector" for background detecor. Improve thing selector coercion 2026-01-14 15:10:13 +00:00
Julian Stirling
6b97d2da44 Fix unit tests for background detectors as Things 2026-01-14 10:05:04 +00:00
Julian Stirling
3e8874188e Get UI working for background detector things 2026-01-14 10:05:04 +00:00
Julian Stirling
44860bf777 Continue turning background detectors back into Things 2026-01-14 10:05:04 +00:00
Julian Stirling
0bba613a4b Apply suggestions from code review of branch fast-sim 
Co-authored-by: Joe Knapper <joe.knapper@glasgow.ac.uk>
 2026-01-13 11:45:32 +00:00
Julian Stirling
51d6bdb991 Fully generate simulation sample canvas before setting to class attribute 2026-01-13 11:34:49 +00:00
Julian Stirling
4c557612fb Apply suggestions from code review of branch fast-sim 
Co-authored-by: Richard Bowman <richard.bowman@cantab.net>
Co-authored-by: Joe Knapper <joe.knapper@glasgow.ac.uk>
 2026-01-12 17:41:51 +00:00
Julian Stirling
0abbd827fd Remove exception block from simulation that only silence errors and errors that are impossible to reach 2026-01-12 16:17:11 +00:00
Julian Stirling
8f52841f67 Add tests for new simulated camera poperites that update the canvas 2026-01-12 16:17:11 +00:00
Julian Stirling
fa89f24477 Type fixing for simulation camera 2026-01-12 16:17:11 +00:00
Julian Stirling
fc3ca8cbe7 Slightly increase glyph shape so that blob cannot touch edge 2026-01-12 16:17:10 +00:00
Julian Stirling
980af66548 Let lists of colours be set for simulation sample. 2026-01-12 16:17:10 +00:00
Julian Stirling
11379d8fa7 Allow colour to be set for simulation sample. 2026-01-12 16:17:10 +00:00
Julian Stirling
7b9f4aa202 Expose sample density and sample repeat for simulation camera to the UI in camera settings rather than as init options 2026-01-12 16:17:10 +00:00
Julian Stirling
159e2d14ab Unify canvas and sample shape for simulation, set flag for if repeating. 2026-01-12 16:17:10 +00:00
Julian Stirling
99f7802195 Create sprites upsampled, before downsampling so they hhave a smoother edge interpolation 2026-01-12 16:17:10 +00:00
Julian Stirling
fa249a0f24 Calculate simulation images downsampled for speed 2026-01-12 16:17:10 +00:00
Julian Stirling
06cab8a6a4 Use type[] not Type[] in typehints, and add clarification comment. 2026-01-12 15:28:10 +00:00
Julian Stirling
141ccc06c1 Some minor type fixes 2026-01-09 15:18:05 +00:00
Julian Stirling
99eee2e912 Fix camera type issues 2026-01-09 15:18:05 +00:00
Julian Stirling
afeca2bbed Fix picamera tuning setting type 2026-01-09 15:18:05 +00:00
Julian Stirling
5df5651fc2 Adjust name for a number of propery/setting setters 2026-01-09 15:18:05 +00:00
Julian Stirling
51512f36f7 Unify UI for action_button_for and property_control_for 2026-01-09 15:18:04 +00:00
Julian Stirling
afbc00acef Improve __enter__ typing for things 2026-01-09 15:18:04 +00:00
Julian Stirling
d52548cc13 Improve camera buffer typing 2026-01-09 15:18:04 +00:00
Julian Stirling
e0c63ab354 Unify camera capute signatures 2026-01-09 15:18:04 +00:00
Julian Stirling
4060c06a2b Assorted type fixes 2026-01-09 15:18:04 +00:00
Julian Stirling
99f3d2d311 Start fixing some issues found by MyPy 2026-01-09 15:18:04 +00:00
Julian Stirling
4ad1fff656 Remove final dependencies 2025-12-17 15:52:03 +00:00
Julian Stirling
4b845fcf18 Remove dependencies from camera 2025-12-16 14:22:31 +00:00
Julian Stirling
ddc81f9c17 Apply suggestions from code review of branch update-for-labthings0.0.12 
Co-authored-by: Richard Bowman <richard.bowman@cantab.net>
 2025-12-16 13:32:57 +00:00
Julian Stirling
a67afdf21f Fix bug in simulation frame timing which may be affecting integration test 2025-12-16 13:32:57 +00:00
Julian Stirling
baf0ff9a11 Updating for changes related to NotConnectedToServerErrors 2025-12-15 17:18:30 +00:00
Julian Stirling
cfbb7cf7f9 Start fixing tests. This involves further blocking portal changes. 
This will need PR 225 of labthings-fastapi to be merged to run.
 2025-12-14 19:21:06 +00:00
Julian Stirling
9ef417971f Remove a load more /names/ 2025-12-14 18:23:33 +00:00