rahix/openflexure-microscope-server
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91 commits

Author SHA1 Message Date
Richard
55a9f49fd2 Sundry linting/debug removal 2021-05-29 13:06:52 +01:00
Richard
6a353ccbd3 Added UI controls to enable ImJoy and gallery 
There are now tick boxes in "features" settings to
enable/disable ImJoy and the gallery.
These persist in local storage.
 2021-05-29 13:06:13 +01:00
Richard
dac1c9a748 Merge branch 'master' into imjoy-support 2021-05-29 12:10:01 +01:00
Richard Bowman
de28b0e2f6 Merge branch 'improve-local-development' into 'master' 
Local development improvements

See merge request openflexure/openflexure-microscope-server!125
 2021-05-18 10:56:10 +00:00
Richard Bowman
4d405443bb Merge branch 'scan-shape-limits' into 'master' 
Add minimum scan dimension

See merge request openflexure/openflexure-microscope-server!123
 2021-05-18 10:55:06 +00:00
Richard
3e0be6fa81 Set icon based on window id, not name 2021-05-18 11:36:48 +01:00
Richard
9ba9bccd90 Added a hash to the service type name 
This is required by the updated imjoy core

Co-authored-by: Kaspar Emanuel <kaspar@monostable.co.uk>
 2021-05-18 11:31:31 +01:00
Wei Ouyang
de5a0f6d6b Fix scan name 2021-05-14 11:57:41 +02:00
Wei Ouyang
344146639d Remove item 2021-05-14 11:44:53 +02:00
Wei Ouyang
d2d0dc4518 Add comment 2021-05-14 11:41:22 +02:00
Wei Ouyang
f129244c26 Fix _rvalue key error 2021-05-14 11:36:48 +02:00
Wei Ouyang
508d9d9acf Support imagej.js stack, upgrade core; 2021-05-14 11:11:06 +02:00
Richard
7585e24744 Swap windows for tabs 
Each ImJoy window now gets its own top-level tab.
This involved some fairly significant refactoring of the ImJoy
component, but I think it's cleaner now.
I've moved imjoy-related stuff into a store "module" to keep it clean.
 2021-05-13 17:10:36 +01:00
Richard
0e16835e1b Streamlined code and added multi-JPEG 
It's now possible to open a folder of JPEGs
in ImageJ at once; they appear as separate, named images.
 2021-05-12 17:15:17 +01:00
Richard
a1fce44a4d kludge to fix the color of text in drop-down 
something strange is happening with CSS precedence that makes the
elements of the dropdown go white-on-white.
I have added a specific color:black to fix this.
 2021-05-11 22:01:11 +01:00
Richard
b0f26f1b1e Transfers of stacks and using ndarrays 2021-05-11 21:43:33 +01:00
Richard
0bdb5b4721 Actually save stream settings to local storage 
After some refactoring, I lost the code that actually
saved stream settings to local storage.
This commit restores that functionality.
 2021-05-05 16:19:43 +01:00
Wei Ouyang
c9cd6fc3bf Bump core version and fix service interface 2021-04-27 19:17:17 +00:00
Richard
82a277b04c Cache stream settings in local storage 
GPU preview and MJPEG stream settings are now persisted
using localStorage.  The old code that disabled
the stream for local connections now
just sets the initial/default value.

The initialisation of stream settings is now done
in the created() method of streamContent.vue.

I've eliminated the "globalsafetogglepreview" event
in favour of watching the store.
 2021-04-27 16:36:55 +01:00
Richard
e14800b549 linter fixes 2021-04-27 14:28:08 +01:00
Richard
6b8d34761c Merge remote-tracking branch 'origin/master' into imjoy-support 
Merge in changes from master,

This matters because we need to get the fixes to Python
package management and the stage API for absolute moves.
 2021-04-27 12:25:12 +01:00
Richard
297908fbc8 Stage move API now works 
The test plugin seems to have problems
calling setPosition more than once.
We don't understand this...

Co-authored-by: Kaspar Emanuel <kaspar@monostable.co.uk>
 2021-04-27 12:23:37 +01:00
Richard
757ee216cf Merge branch 'imjoy-support' of gitlab.com:rwb27/openflexure-microscope-server into imjoy-support 2021-04-27 11:31:20 +01:00
Richard Bowman
1f1a75c02a Merge branch 'master' into auto-exposure-gain-awb 2021-04-21 12:10:47 +01:00
Wei Ouyang
ab2523e231 Use official version of default_base_frame.html 2021-04-07 10:05:27 +00:00
Wei Ouyang
2a8536c386 Allow insecure url in imjoy plugins 2021-04-07 09:49:09 +00:00
Kaspar Emanuel
97bbbdee84 Merge branch 'ihi_scan' into 'master' 
IHI scan style raster

See merge request openflexure/openflexure-microscope-server!113
 2021-03-30 12:29:32 +00:00
Richard
9d81a80bbb Fixed infinite loop in pollUntilComplete 2021-03-24 13:25:54 +00:00
Richard
024f2566f0 Working stage positioning 
NB there is a server bug that means absolute moves fail -
this should be fixed in a separate branch.
 2021-03-24 13:23:20 +00:00
Richard Bowman
cd30872d62 Split out action polling to separate function. 2021-03-09 21:56:06 +00:00
Richard Bowman
2b0b548307 Removed some TODOs because we did them! 2021-03-09 12:16:36 +00:00
Richard Bowman
0165f0a798 Populated snapImage and getImage 
Co-authored-by: Kaspar Emanuel <kaspar@monostable.co.uk>
 2021-03-09 12:12:28 +00:00
Richard Bowman
03a4f36556 Remove spurious GPU preview event 2021-03-01 12:20:04 +00:00
Richard Bowman
a7bb0f9423 Reset tour button and URL origin 
Reset tour button resets the local storage used to mark the tour
as done.

Overriding the origin can now be done with a query string.
This will load the store with the new origin from the start,
so might be better for testing some things.
I'm not worried about unexpected bugs, as it is quite obvious
from the URL what's going on.
 2021-02-23 15:56:15 +00:00
Richard Bowman
621b99eb9b Switch tab when opening with ImJoy 2021-02-23 12:27:58 +00:00
Richard Bowman
9b52865f95 Added an implementation of snapImage() to API 
Co-authored-by: Kaspar Emanuel <kaspar@monostable.co.uk>
 2021-02-23 12:08:20 +00:00
Richard Bowman
1e45640195 Added control to reset LST 
You can now recalibrate the LST without running auto-gain.
 2021-02-15 20:19:39 +00:00
Richard Bowman
36284c10be UI Improvements 
I've added buttons to perform the separate calibrations (gain, AWB)
under the full recalibrate link.
It would be really nice to have a modal dialog though.
 2021-02-15 19:17:20 +00:00
Richard Bowman
2f6049610f Added controls for AWB gains, 
I also increased the precision of the numbers, which makes the step
buttons annoyingly useless but allows floating point
values without validation errors.
 2021-02-15 17:50:39 +00:00
oeway
1c8ebfce32 Add todo note 2021-02-14 22:45:18 +01:00
oeway
52c40791a9 Support Engine 2021-02-14 22:40:37 +01:00
oeway
6436034ccb Fix time 2021-02-14 22:21:01 +01:00
oeway
f80500fbb5 Improve showStatus/Message/Progress 2021-02-14 22:20:00 +01:00
oeway
e460c0faff Add template for microscope api and script editor 2021-02-14 21:17:15 +01:00
oeway
3b002d59a5 Add ImageJ.JS and Kaibu to the plugin menu 2021-02-14 20:04:59 +01:00
oeway
a692b90ede Load ITK VTK viewer 2021-02-14 18:16:50 +01:00
oeway
61c49e520f Support ImageJ.JS 2021-02-14 17:40:39 +01:00
Richard Bowman
cfa5297a23 Added an "open in kaibu" link 2021-02-09 12:45:48 +00:00
Richard Bowman
0a0687cdd6 Added imjoy support 
We now have an imjoy tab and the ability to load plugins
 2021-02-09 11:46:29 +00:00
Richard Bowman
fc86745006 Fix whitespace 2021-02-09 10:19:56 +00:00