Commit graph

243 commits

Author SHA1 Message Date
Joel Collins
31efadd884 Removed debug code 2019-02-19 13:41:58 +00:00
Joel Collins
e738837101 Fixed broken piexif imports 2019-02-19 13:26:18 +00:00
Joel Collins
c6eb6148cc Packaged basic Piexif module 2019-02-19 12:02:11 +00:00
Joel Collins
366b771b72 Added size and position params to GPU preview route 2019-02-19 11:04:12 +00:00
Joel Collins
51cd776700 Store stage position in metadata 2019-02-19 10:43:33 +00:00
Joel Collins
184e3d9558 Fixed format checks for loading exif data 2019-02-18 17:25:50 +00:00
Joel Collins
e8fb3b378c Fixed missing capture validation 2019-02-18 12:11:33 +00:00
Joel Collins
ab70a3857c Only use exif if supported format 2019-02-18 11:48:56 +00:00
Joel Collins
05f52bbdeb Process all initial tags in one call 2019-02-18 11:30:38 +00:00
Joel Collins
340b3dda89 Initial testing for exif metadata 2019-02-18 10:53:18 +00:00
Joel Collins
2314084cb1 Made thumbnails bigger, for new Vue client 2019-02-14 17:18:26 +00:00
Joel Collins
404f28a8e0 Add metadata and tags at capture-time 2019-02-14 17:00:27 +00:00
Joel Collins
ed12cc7bce Fixed metadata and tags not storing to capture DB on update or exit 2019-02-13 15:17:52 +00:00
Joel Collins
35041af234 axes_to_array defaults to converting to int 2019-02-12 11:27:42 +00:00
Joel Collins
1bbe234749 Fixed issue #42 2019-02-11 10:00:44 +00:00
Joel Collins
88b946b473 Improved runtime-config docs 2019-02-07 11:19:00 +00:00
Joel Collins
1436e58283 Improed CaptureObject documentation 2019-02-06 15:18:02 +00:00
Richard Bowman
0520f058ad Explicitly set ISO=0 (auto) when adjusting gain. 2019-02-05 18:42:50 +00:00
Joel Collins
5672b82f5e Added many many debug statements to help debug issue #32 2019-02-05 17:06:05 +00:00
Joel Collins
0948c9308a Went on a PEP-8 rampage 2019-01-31 17:20:46 +00:00
Joel Collins
f99ad30fb6 Started PEP-8-ing 2019-01-31 16:48:59 +00:00
Joel Collins
d4e7d067a3 Removed fraction conversion 2019-01-31 16:48:39 +00:00
Joel Collins
63336757d4 Better handle missing error.message 2019-01-31 16:48:19 +00:00
Joel Collins
04bed170a0 Added JSON safety to config reads 2019-01-31 16:47:54 +00:00
Joel Collins
0fd0cd8bac Option to read a JSON-safe version of config (type conversion and exclusion of lens shading data) 2019-01-31 16:47:26 +00:00
Joel Collins
036fb82628 Moved calibration plugin to defaults. Save config when calibration finishes. 2019-01-31 16:46:34 +00:00
Joel Collins
8ed4cca19c Added calibration plugin to defaults 2019-01-31 16:45:28 +00:00
Joel Collins
e9d74c07e6 Separated updating/writing from saving config 2019-01-31 13:51:02 +00:00
Joel Collins
8087e4d445 Updated to use apply_config and read_config instead of setters and getters 2019-01-31 13:34:14 +00:00
Joel Collins
5471ffa62b Introduced apply_config and read_config methods 2019-01-31 13:29:07 +00:00
Joel Collins
e5c10adf8d Rewritten to remove config redundancy 2019-01-31 13:28:15 +00:00
Joel Collins
cb122e5ef6 Moved static methods to functions 2019-01-31 13:27:35 +00:00
Joel Collins
323c48858d Updated to use api_microscope.rc.asdict(), and minor formatting changes 2019-01-31 13:26:56 +00:00
Joel Collins
36b0cb0be0 Save config on server shutdown 2019-01-30 18:23:58 +00:00
Joel Collins
7a63451063 Added docstring 2019-01-30 18:23:48 +00:00
Joel Collins
92ac947982 Demoted missing attribute warning to debug 2019-01-30 18:23:40 +00:00
Joel Collins
cd1e450a2b Fixed massive bug in config contraction 2019-01-30 18:23:26 +00:00
Joel Collins
e0c09b2845 Fixed plugin path 2019-01-30 18:22:54 +00:00
Joel Collins
f2a3261b03 Overhauled config loader to allow split configs 2019-01-30 17:45:11 +00:00
Joel Collins
f720e67700 Updated path to new autofocus plugin 2019-01-30 13:59:39 +00:00
Joel Collins
4450ee132e Moved autofocus plugin to its own module 2019-01-30 13:51:20 +00:00
Joel Collins
a6791d55ac Plugin routes are now fully qualified 2019-01-30 13:51:09 +00:00
Joel Collins
0c156128fc Minor formatting changes 2019-01-30 12:02:35 +00:00
Joel Collins
7ad1e7507f Use a sensible error handler 2019-01-30 12:02:27 +00:00
Joel Collins
e6ddeaeb3a Create lock even when stage is disconnected 2019-01-30 12:00:30 +00:00
Joel Collins
73eda19acc Merge branch 'recalibration_plugin' into 'master'
A plugin to allow recalibration via the web API

See merge request openflexure/openflexure-microscope-server!4
2019-01-30 09:47:25 +00:00
Richard Bowman
416b74cb4a A plugin to allow recalibration via the web API
This adds a plugin with a single endpoint, "recalibrate".
The recalibrate methods are deliberately simple and not aware
of the StreamingCamera because I want to share the maximum
amount of code with non-microscope projects that also want
to flatten the lens shading.

The plugin is microscope-specific, and therefore handles
shutting down the stream and managing the resolution of
the camera, to allow the calibration to run without
restarting the microscope server.

Currently it **DOES NOT SAVE SETTINGS**.

TODO: save the settings after recalibration.

Arguably this isn't a job for this plugin, what we would
need is:
* A method to sync the StreamingCamera's settings with the
  underlying PiCamera object
* A method to save the StreamingCamera's settings to disk.
I think it would be neatest to provide the first of these as
a method of the StreamingCamera class, and call it from the
plugin.  Saving the settings to disk (e.g. to the microscope
rc file, or to somewhere else) should be a separate endpoint
(although most interfaces will probably call it immediately
after recalibration).
2019-01-30 09:10:33 +00:00
Joel Collins
6743882bf1 Corrected the abort code for missing resource 2019-01-29 14:43:22 +00:00
Joel Collins
d7e19c40e2 Included Richards autofocus plugin in defaults 2019-01-29 13:54:47 +00:00
Joel Collins
cc36aa7593 Fixed a bug where malformed JSON payloads prevented default param values from returning 2019-01-29 13:54:32 +00:00