Fix confusion between (x,y) image coordinates and (y,x) matrix indicies

src/openflexure_microscope_server/utilities.py

@@ -11,7 +11,6 @@ from typing import (
     overload,
     TypeAlias,
     Literal,
-    Mapping,
 )
 import os
 import re
@@ -23,7 +22,6 @@ import tomllib
 from functools import wraps
 import json
 
-import numpy as np
 from pydantic import BaseModel
 
 T = TypeVar("T")
@@ -477,54 +475,3 @@ def resolve_path_from_dir(path: str, directory: str) -> str:
     if not os.path.isabs(path):
         path = os.path.join(directory, path)
     return os.path.normpath(path)
-
-
-# Use overload to that the dict is either of integers or of float depending on the
-# to_int argument
-@overload
-def apply_2d_matrix_to_mapping(
-    matrix: np.ndarray,
-    *,
-    x: float | int,
-    y: float | int,
-    to_int: Literal[False],
-    **_kwargs: int,
-) -> Mapping[str, float]: ...
-@overload
-def apply_2d_matrix_to_mapping(
-    matrix: np.ndarray,
-    *,
-    x: float | int,
-    y: float | int,
-    to_int: Literal[True],
-    **_kwargs: int,
-) -> Mapping[str, int]: ...
-@overload
-def apply_2d_matrix_to_mapping(
-    matrix: np.ndarray, *, x: float | int, y: float | int, **_kwargs: int
-) -> Mapping[str, float]: ...
-
-
-def apply_2d_matrix_to_mapping(
-    matrix: np.ndarray,
-    *,
-    x: float | int,
-    y: float | int,
-    to_int: bool = False,
-    **_kwargs: int,
-) -> Mapping[str, int] | Mapping[str, float]:
-    """Perform a dot product with a (x,y) vector and a matrix. The result is a mapping.
-
-    This is designed x and y must be kwargs and extra kwargs are ignored allowing:
-    ``apply_2d_matrix_to_mapping(matrix, **position)`` to run for a mapping position.
-
-    :param matrix: The matrix to use in the calculation
-    :param x: the x coordinate (keyword only)
-    :param y: the y coordinate (keyword only)
-    :param to_int: Whether to convert the resulting coordinates to integers
-    :return: The resulting coordinates as a mapping.
-    """
-    relative_move: np.ndarray = np.dot(np.array([y, x]), np.array(matrix))
-    if to_int:
-        return {"x": round(relative_move[0]), "y": round(relative_move[1])}
-    return {"x": float(relative_move[0]), "y": float(relative_move[1])}