Overhauled config loader to allow split configs
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6 changed files with 210 additions and 184 deletions
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@ -1,7 +1,9 @@
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import yaml
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import os
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import errno
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import logging
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import shutil
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import copy
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HERE = os.path.abspath(os.path.dirname(__file__))
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DEFAULT_CONFIG_PATH = os.path.join(HERE, 'microscoperc.default.yaml')
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@ -9,100 +11,158 @@ DEFAULT_CONFIG_PATH = os.path.join(HERE, 'microscoperc.default.yaml')
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USER_CONFIG_DIR = os.path.join(os.path.expanduser("~"), ".openflexure") #: str: Default path of the user-config directory, containing runtime-config and calibration files. Obtained from ``os.path.join(os.path.expanduser("~"), ".openflexure")``.
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USER_CONFIG_FILE = os.path.join(USER_CONFIG_DIR, "microscoperc.yaml") #: str: Default path of the user microscoperc.yaml runtime-config file. Obtained from ``os.path.join(USER_CONFIG_DIR, "microscoperc.yaml")``
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TYPES = {
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'stream_resolution': tuple,
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'video_resolution': tuple,
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'image_resolution': tuple,
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'numpy_resolution': tuple,
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'jpeg_quality': int,
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'analog_gain': float,
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'digital_gain': float,
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} #: dict: Dictionary of expected types for common config parameters. Used by ``convert_config()``.
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with open(DEFAULT_CONFIG_PATH, 'r') as defaultrc:
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DEFAULT_CONFIG = defaultrc.read()
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def convert_config(config: dict) -> dict:
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"""
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Convert datatype of top-level config parameters based on the global TYPES dictionary.
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class OpenflexureConfig():
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expandable_keys = [
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'picamera_settings',
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'openflexure_stage_settings',
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] #: List of keys that can be passed as a file path string and expanded automatically
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def __init__(self, config_path: str=None, expand: bool=True):
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global DEFAULT_CONFIG, USER_CONFIG_FILE
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# Set arguments
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self.config_path = config_path or USER_CONFIG_FILE
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self.expand = expand
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# Create empty config dictionaries
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self.raw_config = {}
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# Expanded config dictionary (used by server)
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self.config = copy.copy(self.raw_config)
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# Initialise basic config file with defaults if it doesn't exist
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self.initialise_file(self.config_path, populate=DEFAULT_CONFIG)
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# Load the config in, setting self._config and self.config
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self.load()
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def update(self, update_dict: dict):
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self.config.update(update_dict)
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def overwrite(self, new_dict: dict):
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self.config = new_dict
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def load(self):
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# Unexpanded config dictionary (used at load/save time)
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self.raw_config = self.load_yaml_file(self.config_path)
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# If the loaded config is in contracted format
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if self.expand:
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# Expand self.raw_config into self._config
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self.expand_config()
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def save(self, backup: bool=True):
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# If the loaded config was in contracted format
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if self.expand:
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# Contract self._config into self.raw_config
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self.contract_config()
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Args:
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config (dict): Dictionary representation of a loaded runtime-config.
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"""
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global TYPES
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if backup:
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if os.path.isfile(self.config_path):
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shutil.copyfile(self.config_path, self.config_path+".bk")
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for key in config:
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if key in TYPES:
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config[key] = TYPES[key](config[key])
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self.save_yaml_file(self.config_path, self.raw_config)
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return config
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def expand_config(self):
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# For each value in the raw loaded config
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for key, value in self.raw_config.items():
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# If it's a valid expandable parameter
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if (key in OpenflexureConfig.expandable_keys and
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type(value) is str):
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logging.debug("Expanding {}".format(value))
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# Initialise, load and expand
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self.initialise_file(value)
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self.config[key] = self.load_yaml_file(value) or {}
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else:
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self.config[key] = value
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def load_config(config_path: str=None) -> dict:
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"""
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Open openflexurerc.yaml runtime-config file and write to the microscope devices.
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def contract_config(self):
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for key, value in self.config.items():
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# If it's a valid expandable parameter
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if (key in OpenflexureConfig.expandable_keys and
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type(value) is dict):
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Args:
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config_path (str): Path to the config YAML file. If `None`, defaults to `DEFAULT_CONFIG_PATH`
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"""
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global DEFAULT_CONFIG_PATH, USER_CONFIG_FILE
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if not config_path:
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if os.path.exists(USER_CONFIG_FILE): # If user config file already exists
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config_path = USER_CONFIG_FILE # Load it
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else: # If user config file doesn't yet exist
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logging.warning("No user config found. Loading system defaults...")
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if not os.path.exists(USER_CONFIG_DIR):
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logging.info("Making user config directory...")
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os.makedirs(USER_CONFIG_DIR)
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logging.info("Copying default config to user config...")
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shutil.copyfile(DEFAULT_CONFIG_PATH, USER_CONFIG_FILE)
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logging.info("Loading user config...")
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config_path = USER_CONFIG_FILE # Load defaults in
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with open(config_path) as config_file:
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config_data = yaml.load(config_file)
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# Store config dictionary to self
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return convert_config(config_data)
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# Create the file if it doesn't exist
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self.initialise_file(value)
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self.save_yaml_file(self.raw_config[key], value)
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else:
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self.raw_config = value
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def save_config(config_dict: dict, config_path: str=None, safe: bool=False):
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"""
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Save current config dictionary to a YAML file.
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def load_yaml_file(self, config_path) -> dict:
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"""
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Open a .yaml config file
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Args:
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config_dict (dict): Dictionary of config data to save.
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config_path (str): Path to the config YAML file. If `None`, defaults to `DEFAULT_CONFIG_PATH`
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"""
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global USER_CONFIG_FILE
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if not config_path:
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config_path = USER_CONFIG_FILE
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Args:
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config_path (str): Path to the config YAML file. If `None`, defaults to `DEFAULT_CONFIG_PATH`
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"""
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config_path = os.path.expanduser(config_path)
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with open(config_path, 'w') as outfile:
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if not safe:
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yaml.dump(config_dict, outfile)
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else:
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yaml.safe_dump(config_dict, outfile)
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logging.info("Loading {}...".format(config_path))
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with open(config_path) as config_file:
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config_data = yaml.load(config_file)
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# Return loaded config dictionary
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return config_data
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def merge_config(config_dict: dict, config_path: str=None, safe: bool=False, backup: bool=True):
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"""
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merge current config dictionary with an existing YAML file.
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def save_yaml_file(self, config_path: str, config_dict: dict, safe: bool=False):
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"""
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Save a .yaml config file
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Args:
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config_dict (dict): Dictionary of config data to save.
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config_path (str): Path to the config YAML file. If `None`, defaults to `DEFAULT_CONFIG_PATH`
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"""
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global USER_CONFIG_FILE
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if not config_path:
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config_path = USER_CONFIG_FILE
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Args:
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config_dict (dict): Dictionary of config data to save.
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config_path (str): Path to the config YAML file.
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"""
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config_path = os.path.expanduser(config_path)
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config_data = load_config(config_path=config_path)
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logging.info("Saving {}...".format(config_path))
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for key, value in config_dict.items():
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config_data[key] = value
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with open(config_path, 'w') as outfile:
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if not safe:
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yaml.dump(config_dict, outfile)
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else:
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yaml.safe_dump(config_dict, outfile)
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if backup:
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if os.path.isfile(config_path):
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shutil.copyfile(config_path, config_path+".bk")
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save_config(config_data, config_path=config_path, safe=safe)
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def initialise_file(self, config_path, populate: str=""):
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"""
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Check if a file exists, and if not, create it
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and optionally populate it with content
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Args:
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config_path (str): Path to the file.
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populate (str): String to dump to the file, if it is being newly created
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"""
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config_path = os.path.expanduser(config_path)
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logging.debug("Initialising {}".format(config_path))
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logging.debug("Exists: {}".format(os.path.exists(config_path)))
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if not os.path.exists(config_path): # If user config file doesn't exist
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logging.warning("No config file found at {}. Creating...".format(config_path))
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self.create_file(config_path)
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logging.info("Populating {}...".format(config_path))
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with open(config_path, 'w') as outfile:
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outfile.write(populate)
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def create_file(self, config_path):
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if not os.path.exists(os.path.dirname(config_path)):
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try:
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os.makedirs(os.path.dirname(config_path))
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except OSError as exc: # Guard against race condition
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if exc.errno != errno.EEXIST:
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raise
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