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Remove one final invocation logger dep from autofocus

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This commit is contained in:
Julian Stirling 2025-12-17 09:49:00 +00:00
parent 09336c9cb5
commit e1dfceb0bd
3 changed files with 11 additions and 30 deletions
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26
tests/test_stack.py
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@ -26,7 +26,6 @@ from openflexure_microscope_server.things.autofocus import (
_get_peak_turning_point,
)
LOGGER = logging.getLogger("mock-invocation_logger")
RANDOM_GENERATOR = np.random.default_rng()
@ -274,10 +273,7 @@ def test_create_stack(autofocus_thing, caplog):
initial_images_to_save = autofocus_thing.stack_images_to_save
with caplog.at_level(logging.INFO):
stack_params = autofocus_thing.create_stack_params(
autofocus_dz=2000,
images_dir="/this/is/fake",
save_resolution=(1640, 1232),
logger=LOGGER,
autofocus_dz=2000, images_dir="/this/is/fake", save_resolution=(1640, 1232)
)
assert len(caplog.records) == 0
@ -304,10 +300,7 @@ def test_coercing_stack_test_ims(
with caplog.at_level(logging.WARNING):
stack_params = autofocus_thing.create_stack_params(
autofocus_dz=2000,
images_dir="/this/is/fake",
save_resolution=(1640, 1232),
logger=LOGGER,
autofocus_dz=2000, images_dir="/this/is/fake", save_resolution=(1640, 1232)
)
assert len(caplog.records) == 1
@ -335,10 +328,7 @@ def test_coercing_stack_save_ims(
with caplog.at_level(logging.WARNING):
stack_params = autofocus_thing.create_stack_params(
autofocus_dz=2000,
images_dir="/this/is/fake",
save_resolution=(1640, 1232),
logger=LOGGER,
autofocus_dz=2000, images_dir="/this/is/fake", save_resolution=(1640, 1232)
)
assert len(caplog.records) == 1
@ -353,10 +343,7 @@ def test_coercing_stack_save_ims(
def test_run_smart_stack(pass_on, autofocus_thing, mocker):
"""Test Running smart stack with the stack passing on different attempts."""
stack_params = autofocus_thing.create_stack_params(
autofocus_dz=2000,
images_dir="/this/is/fake",
save_resolution=(1640, 1232),
logger=LOGGER,
autofocus_dz=2000, images_dir="/this/is/fake", save_resolution=(1640, 1232)
)
assert stack_params.max_attempts == 3
@ -417,10 +404,7 @@ def setup_and_run_z_stack(check_returns, check_turning_points, autofocus_thing,
results). If it a tuple (or anything else), it is set as a return value.
"""
stack_params = autofocus_thing.create_stack_params(
autofocus_dz=2000,
images_dir="/this/is/fake",
save_resolution=(1640, 1232),
logger=LOGGER,
autofocus_dz=2000, images_dir="/this/is/fake", save_resolution=(1640, 1232)
)
stack_params.settling_time = 0 # Don't settle or tests take forever.