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Default resize in stitching for scan tab stitching

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jaknapper 2025-05-07 22:15:11 +01:00 • committed by Julian Stirling
parent 9f2a131f1e
commit dbed1c6971
1 changed files with 3 additions and 1 deletions
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4
src/openflexure_microscope_server/things/smart_scan.py
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@ -733,6 +733,7 @@ class SmartScanThing(Thing):
logger=self._scan_logger, logger=self._scan_logger,
scan_name=self._ongoing_scan_name, scan_name=self._ongoing_scan_name,
overlap=self._scan_data["overlap"], overlap=self._scan_data["overlap"],
stitch_resize=self._stitch_resize,
) )
self.promote_stitch_files(self._scan_logger) self.promote_stitch_files(self._scan_logger)
except SubprocessError as e: except SubprocessError as e:
@ -1086,6 +1087,7 @@ class SmartScanThing(Thing):
logger: InvocationLogger, logger: InvocationLogger,
scan_name: str, scan_name: str,
overlap: float = 0.0, overlap: float = 0.0,
stitch_resize: float = 0.25,
) -> None: ) -> None:
"""Generate a stitched image based on stage position metadata """Generate a stitched image based on stage position metadata
@ -1132,7 +1134,7 @@ class SmartScanThing(Thing):
"--minimum_overlap", "--minimum_overlap",
f"{round(overlap * 0.9, 2)}", f"{round(overlap * 0.9, 2)}",
"--resize", "--resize",
f"{self._stitch_resize}", f"{stitch_resize}",
images_folder, images_folder,
], ],
) )