diff --git a/src/openflexure_microscope_server/server/__init__.py b/src/openflexure_microscope_server/server/__init__.py
index 52ee182f..546f7118 100644
--- a/src/openflexure_microscope_server/server/__init__.py
+++ b/src/openflexure_microscope_server/server/__init__.py
@@ -93,8 +93,10 @@ def customise_server(
         lt.logs.configure_thing_logger(logging.DEBUG)
 
     # Add an endpoint to get the logs - (directly calling the FastAPI decorator)
-    server.app.get("/log/")(retrieve_log)
-    server.app.get("/logfile/")(retrieve_log_from_file)
+    server.app.get(str(server._api_prefix.rstrip("/")) + "/log/")(retrieve_log)
+    server.app.get(str(server._api_prefix.rstrip("/")) + "/logfile/")(
+        retrieve_log_from_file
+    )
 
 
 def serve_from_cli(argv: Optional[list[str]] = None) -> None:
diff --git a/tests/unit_tests/test_server_config.py b/tests/unit_tests/test_server_config.py
index 1aab586d..25dea30f 100644
--- a/tests/unit_tests/test_server_config.py
+++ b/tests/unit_tests/test_server_config.py
@@ -63,6 +63,7 @@ def test_customise_server(mocker):
     mocked_retrieve_log = mocker.patch.object(ofm_server, "retrieve_log")
     mocked_retrieve_log_file = mocker.patch.object(ofm_server, "retrieve_log_from_file")
 
+    mock_server._api_prefix = "/api/v3/"
     mock_app = mock_server.app
     # The wrapper returned for app.get so we can see what functions are decorated.
     wrapper = mock_app.get.return_value
@@ -82,8 +83,8 @@ def test_customise_server(mocker):
 
     # Check the routes and functions are as expected.
     added_routes = [call.args[0] for call in mock_app.get.call_args_list]
-    assert "/log/" in added_routes
-    assert "/logfile/" in added_routes
+    assert "/api/v3/log/" in added_routes
+    assert "/api/v3/logfile/" in added_routes
     wrapped_functions = [call.args[0] for call in wrapper.call_args_list]
     assert mocked_retrieve_log in wrapped_functions
     assert mocked_retrieve_log_file