Initial commit
This commit is contained in:
Joel Collins
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95e10b14dc
5 changed files with 627 additions and 0 deletions
117
index.html
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117
index.html
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<html>
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<head>
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<title>OpenFlexure Microscope API Demo</title>
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<link rel= "stylesheet" type= "text/css" href="./static/style.css">
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<script type="text/javascript" src="./static/main.js"></script>
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<meta name="viewport" content="width=device-width, initial-scale=1.0, minimal-ui, maximum-scale=1.0, user-scalable=0">
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</head>
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<body>
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<div class="row">
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<div class="column left" id="left-sb">
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<h2>Settings</h2>
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Host: <input type="text" id="microscopeHostInput" value="192.168.1.126"><br>
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Port: <input type="number" id="microscopePortInput" value=5000><br>
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<button type="button" onclick="setHostFromInput();">Connect</button>
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<h3>Position</h3>
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<p>
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x: <input type="number" id="x_abs"><br>
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y: <input type="number" id="y_abs"><br>
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z: <input type="number" id="z_abs"><br>
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</p>
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<p>
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<button type="button" onclick="setStagePositionsFromInput();">GO</button>
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<button type="button" onclick="getStagePositions();">Update</button>
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</p>
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<p>
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Doubleclick to position: <input type="checkbox" id="clickPositionCheck" checked><br>
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<div class="flexbox">
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<div class="flexgrow">FOV width:</div>
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<div>
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<input type="number" id="fovXText" onchange="fovX = Number(this.value); updateTextBoxes();" style="width: 7em" >
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</div>
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</div>
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<div class="flexbox">
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<div class="flexgrow">FOV height:</div>
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<div>
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<input type="number" id="fovYText" onchange="fovY = Number(this.value); updateTextBoxes();" style="width: 7em" >
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</div>
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</div>
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</p>
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<h3>Move</h3>
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<p>
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<b>Up/down/left/right:</b> <br>
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Move stage in x-y. <br>
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<b>PgUp/PgDn: </b> <br>
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Move stage in z/focus.
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</p>
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<h4>Velocity:</h4>
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<div class="flexbox">
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<div class="flexgrow">x-y:</div>
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<div>
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<input type="range" id="stageVelocityInput" min="50" max="200" oninput="stageVelocity = Number(this.value); updateTextBoxes();">
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<input type="text" id="stageVelocityText" size="3" disabled>
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</div>
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</div>
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<div class="flexbox">
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<div class="flexgrow">z:</div>
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<div>
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<input type="range" id="focusVelocityInput" min="10" max="100" oninput="focusVelocity = Number(this.value); updateTextBoxes();">
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<input type="text" id="focusVelocityText" size="3" disabled>
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</div>
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</div>
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<p>Scroll to focus: <input type="checkbox" id="scrollFocusCheck" checked></p>
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</div>
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<div class="column middle">
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<div id="left-sb-btn" class="sb-btn">
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<button type="button" onclick="toggleClassToDiv('left-sb', 'hidden');">
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<img src="./static/icons/baseline-settings-20px.svg">
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</button>
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</div>
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<div id="right-sb-btn" class="sb-btn">
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<button type="button" onclick="toggleClassToDiv('right-sb', 'hidden');">
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<img src="./static/icons/baseline-camera_alt-24px.svg">
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</button>
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</div>
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<div id="streambox">No active stream</div>
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</div>
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<div class="column right" id="right-sb">
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<h2>Capture</h2>
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Filename: <br>
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<input type="text" id="captureFilenameInput" placeholder="Leave blank for default"><br>
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Store on Pi: <input type="checkbox" id="captureKeepOnDiskCheck"><br>
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Full resolution: <input type="checkbox" id="captureFullResolutionCheck"><br>
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Keep raw data: <input type="checkbox" id="captureBayerCheck"><br>
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Resize capture: <input type="checkbox" id="captureResizeCheck" onclick="newCaptureResizeToggle(this);"><br>
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<input type="number" id="captureWidthInput" value="640" style="width: 7em" disabled>
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<input type="number" id="captureHeightInput" value="480" style="width: 7em" disabled><br>
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<button type="button" onclick="newCaptureFromInput();">Capture</button>
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<h2>Captures</h2>
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<button type="button" onclick="getCaptures();">Update</button>
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<button type="button" onclick="deleteAllCaptures();">Delete all</button>
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<div id="captures"></div>
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</div>
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</div>
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</body>
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</html>
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1
static/icons/baseline-camera_alt-24px.svg
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1
static/icons/baseline-camera_alt-24px.svg
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<svg xmlns="http://www.w3.org/2000/svg" width="24" height="24" viewBox="0 0 24 24"><circle cx="12" cy="12" r="3.2"/><path d="M9 2L7.17 4H4c-1.1 0-2 .9-2 2v12c0 1.1.9 2 2 2h16c1.1 0 2-.9 2-2V6c0-1.1-.9-2-2-2h-3.17L15 2H9zm3 15c-2.76 0-5-2.24-5-5s2.24-5 5-5 5 2.24 5 5-2.24 5-5 5z"/><path d="M0 0h24v24H0z" fill="none"/></svg>
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After Width: | Height: | Size: 324 B |
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static/icons/baseline-settings-20px.svg
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1
static/icons/baseline-settings-20px.svg
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<svg xmlns="http://www.w3.org/2000/svg" width="20" height="20" viewBox="0 0 20 20"><path fill="none" d="M0 0h20v20H0V0z"/><path d="M15.95 10.78c.03-.25.05-.51.05-.78s-.02-.53-.06-.78l1.69-1.32c.15-.12.19-.34.1-.51l-1.6-2.77c-.1-.18-.31-.24-.49-.18l-1.99.8c-.42-.32-.86-.58-1.35-.78L12 2.34c-.03-.2-.2-.34-.4-.34H8.4c-.2 0-.36.14-.39.34l-.3 2.12c-.49.2-.94.47-1.35.78l-1.99-.8c-.18-.07-.39 0-.49.18l-1.6 2.77c-.1.18-.06.39.1.51l1.69 1.32c-.04.25-.07.52-.07.78s.02.53.06.78L2.37 12.1c-.15.12-.19.34-.1.51l1.6 2.77c.1.18.31.24.49.18l1.99-.8c.42.32.86.58 1.35.78l.3 2.12c.04.2.2.34.4.34h3.2c.2 0 .37-.14.39-.34l.3-2.12c.49-.2.94-.47 1.35-.78l1.99.8c.18.07.39 0 .49-.18l1.6-2.77c.1-.18.06-.39-.1-.51l-1.67-1.32zM10 13c-1.65 0-3-1.35-3-3s1.35-3 3-3 3 1.35 3 3-1.35 3-3 3z"/></svg>
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After Width: | Height: | Size: 774 B |
376
static/main.js
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static/main.js
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var apiVersion = "v1"
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var hostName
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var hostPort
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var baseURI
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// Key IDs
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var pgupKeyID = 33;
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var pgdnKeyID = 34;
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var leftKeyID = 37;
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var upKeyID = 38;
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var rightKeyID = 39;
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var downKeyID = 40;
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var enterKeyID = 13;
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var escKeyID = 27;
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var keysDown = {}; //Array of keys down
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var stageVelocity = 50;
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var focusVelocity = 20;
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var requestLock = false;
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// Microscope client-side callibration
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//TODO: Move to serverside microscope property
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var fovX = 4100;
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var fovY = 3146;
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window.onload = function() {
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setHostFromInput()
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getStagePositions()
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updateTextBoxes()
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getCaptures()
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}
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// Cosmetic methods
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function toggleClassToDiv(div_id, class_name) {
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document.getElementById(div_id).classList.toggle(class_name)
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}
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// Setup methods
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function setHostFromInput() {
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hostName = document.getElementById('microscopeHostInput').value;
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hostPort = document.getElementById('microscopePortInput').value;
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baseURI = `http://${hostName}:${hostPort}/api/${apiVersion}`
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streamContent = `<img src="${baseURI}/stream" ondblclick="clickHotspotImage(event);">`
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document.getElementById("streambox").innerHTML = streamContent;
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}
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// Microscope methods
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function deleteCapture(capture_id) {
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function deleteCaptureCallback(response, status) {
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console.log(status);
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getCaptures();
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}
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var r = confirm("Warning! This will delete all copies of this capture from the Raspberry Pi. Click OK to proceed.");
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if (r == true) {
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safeRequest("DELETE", baseURI+"/camera/capture/"+capture_id+"/", null, deleteCaptureCallback, false)
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}
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}
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function deleteAllCaptures() {
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function deleteAllCapturesCallback(response, status) {
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console.log(status);
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getCaptures();
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}
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var r = confirm("Warning! This will delete all copies of all captures from the Raspberry Pi. Click OK to proceed.");
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if (r == true) {
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safeRequest("DELETE", baseURI+"/camera/capture/", null, deleteAllCapturesCallback, false)
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}
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}
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function getCaptures() {
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function updateCapturesCallback(response, status) {
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console.log(status);
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updateCaptureList(response);
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}
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safeRequest("GET", baseURI+"/camera/capture", null, updateCapturesCallback, false)
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}
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function updateCaptureList(response) {
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// Clear captures list
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var capturesNode = document.getElementById("captures");
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while (capturesNode.firstChild) {
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capturesNode.removeChild(capturesNode.firstChild);
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}
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// For each capture in the response array
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response.forEach(function(element) {
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// Store the capture object URI
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element_uri = `${baseURI}/camera/capture/${element.metadata.id}`
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// Generate inner HTML from capture object
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html = `
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<div class="capture-thumb"><img src="${element_uri}/download?thumbnail=true"></div>
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<div class="capture-actions">
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<div class='capture-heading'>${element.metadata.filename}</div>
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<br>
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<button type="button" class="capture-button" onclick="window.open('${element_uri}/download');">Image</button>
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<button type="button" class="capture-button" onclick="window.open('${element_uri}/metadata');">Metadata</button>
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<br>
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<button type="button" class="capture-button" onclick="window.open('${element_uri}/', '_blank');">JSON</button>
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<button type="button" class="capture-button" onclick="deleteCapture('${element.metadata.id}');">Delete</button>
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<br>
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</div>
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`
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// Create a new capture div, and append HTML
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var div = document.createElement("div");
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div.className = "capture";
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div.innerHTML = html;
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capturesNode.appendChild(div);
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});
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}
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function updateTextBoxes() {
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document.getElementById('stageVelocityText').value = stageVelocity;
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document.getElementById('stageVelocityInput').value = stageVelocity;
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document.getElementById('focusVelocityText').value = focusVelocity;
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document.getElementById('focusVelocityInput').value = focusVelocity;
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document.getElementById('fovXText').value = fovX;
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document.getElementById('fovYText').value = fovY;
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}
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function updateStagePositions(response) {
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document.getElementById('x_abs').value = response.x;
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document.getElementById('y_abs').value = response.y;
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document.getElementById('z_abs').value = response.z;
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}
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function getStagePositions() {
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function updatePositionCallback(response, status) {
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console.log(status, response);
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updateStagePositions(response);
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}
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safeRequest("GET", baseURI+"/stage/position", null, updatePositionCallback, false)
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}
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// Capture methods
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function newCapture(filename, keep_on_disk, use_video_port, bayer, resizeWidth=null, resizeHeight=null) {
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// Make a position request
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function newCaptureCallback(response, status) {
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if (status != 200) {
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alert("Capture failed.");
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}
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console.log(status, response);
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getCaptures(); // Update full list of captures when done
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}
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payload = {
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"filename": filename,
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"keep_on_disk": keep_on_disk,
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"use_video_port": use_video_port,
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"bayer": bayer
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}
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if ((resizeWidth) && (resizeHeight)) {
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payload.size = {
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"width": resizeWidth,
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"height": resizeHeight
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}
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}
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console.log(payload);
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safeRequest("POST", baseURI+"/camera/capture/", payload, newCaptureCallback);
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}
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function newCaptureFromInput() {
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captureFilenameInput = document.getElementById('captureFilenameInput');
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captureKeepOnDiskCheck = document.getElementById('captureKeepOnDiskCheck');
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captureFullResolutionCheck = document.getElementById('captureFullResolutionCheck');
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captureBayerCheck = document.getElementById('captureBayerCheck')
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captureResizeCheck = document.getElementById('captureResizeCheck');
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captureWidthInput = document.getElementById('captureWidthInput')
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captureHeightInput = document.getElementById('captureHeightInput')
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// Get filename if one is given
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if (captureFilenameInput.value === "") {
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filename = null;
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}
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else {
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filename = captureFilenameInput.value;
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}
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if (captureResizeCheck.checked) {
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resizeWidth = Number(captureWidthInput.value);
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resizeHeight = Number(captureHeightInput.value);
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}
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else {
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resizeWidth = null;
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resizeHeight = null;
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}
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newCapture(
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filename,
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captureKeepOnDiskCheck.checked,
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!(captureFullResolutionCheck.checked),
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captureBayerCheck.checked,
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resizeWidth,
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resizeHeight
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);
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}
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function newCaptureResizeToggle(checkbox) {
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captureWidthInput = document.getElementById('captureWidthInput')
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captureHeightInput = document.getElementById('captureHeightInput')
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captureWidthInput.disabled = !(checkbox.checked)
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captureHeightInput.disabled = !(checkbox.checked)
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}
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// Move stage methods
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// TODO: Combine setStagePositions and moveStagePositions, with bool argument for 'absolute'
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function setStagePositions(x_abs, y_abs, z_abs) {
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// Make a position request
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function absMoveCallback(response, status) {
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if (status != 200) {
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alert("Error moving stage.");
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}
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console.log(status, response);
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updateStagePositions(response);
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}
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safeRequest("POST", baseURI+"/stage/position", { "absolute": true, "x": x_abs, "y": y_abs, "z": z_abs}, absMoveCallback)
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}
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function moveStagePositions(x_rel, y_rel, z_rel) {
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// Make a position request
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function relMoveCallback(response, status) {
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if (status != 200) {
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alert("Error moving stage.");
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}
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console.log(status, response);
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updateStagePositions(response);
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}
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safeRequest("POST", baseURI+"/stage/position", { "absolute": false, "x": x_rel, "y": y_rel, "z": z_rel}, relMoveCallback)
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}
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function setStagePositionsFromInput() {
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x_abs = Number(document.getElementById('x_abs').value);
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y_abs = Number(document.getElementById('y_abs').value);
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z_abs = Number(document.getElementById('z_abs').value);
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setStagePositions(x_abs, y_abs, z_abs)
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}
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// Standard callback for user-controller movement
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function keyMoveCallback(response, status) {
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console.log(status, response);
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updateStagePositions(response);
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}
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// Methods for input events
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// Click-to-move
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function clickHotspotImage(event) {
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if (document.getElementById("clickPositionCheck").checked == true) {
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xCoordinate = event.offsetX;
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yCoordinate = event.offsetY;
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console.log(xCoordinate, yCoordinate)
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xRelative = (0.5*event.target.offsetWidth - xCoordinate)/event.target.offsetWidth;
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yRelative = (0.5*event.target.offsetHeight - yCoordinate)/event.target.offsetHeight;
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console.log(xRelative, yRelative)
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xSteps = xRelative * fovX;
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ySteps = yRelative * fovY;
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console.log(xSteps, ySteps, 0)
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// Make a position request
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moveStagePositions(xSteps, ySteps, 0)
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}
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}
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// Scroll-to-focus
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window.addEventListener('wheel', function(e) {
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multiplier = 1/100;
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z_delta = e.deltaY * multiplier * focusVelocity;
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if ((document.getElementById("scrollFocusCheck").checked == true) && (e.target.parentNode.classList.value == "column middle")) {
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console.log(z_delta);
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console.log(e.target.parentNode.classList.value);
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// Make a position request
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safeRequest("POST", baseURI+"/stage/position", { "absolute": false, "z": z_delta}, keyMoveCallback)
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}
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});
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// Keyboard to move
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addEventListener("keydown", function (e) {
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keysDown[e.keyCode] = true; //Add key to array
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// If not currently in an input box
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||||
if (!(e.target instanceof HTMLInputElement)) {
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// TODO: Remove this if condition? Pointless?
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// If stage movement keys are pressed
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if ((leftKeyID in keysDown) || (rightKeyID in keysDown) || (upKeyID in keysDown) || (downKeyID in keysDown) || (pgupKeyID in keysDown) || (pgdnKeyID in keysDown)) {
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// Calculate movement array
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x_rel = 0;
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y_rel = 0;
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z_rel = 0;
|
||||
if (leftKeyID in keysDown) {
|
||||
x_rel = x_rel + stageVelocity;
|
||||
}
|
||||
if (rightKeyID in keysDown) {
|
||||
x_rel = x_rel - stageVelocity;
|
||||
}
|
||||
if (upKeyID in keysDown) {
|
||||
y_rel = y_rel + stageVelocity;
|
||||
}
|
||||
if (downKeyID in keysDown) {
|
||||
y_rel = y_rel - stageVelocity;
|
||||
}
|
||||
if (pgupKeyID in keysDown) {
|
||||
z_rel = z_rel - focusVelocity;
|
||||
}
|
||||
if (pgdnKeyID in keysDown) {
|
||||
z_rel = z_rel + focusVelocity;
|
||||
}
|
||||
|
||||
// Make a position request
|
||||
moveStagePositions(x_rel, y_rel, z_rel)
|
||||
}
|
||||
}
|
||||
|
||||
}, false);
|
||||
|
||||
addEventListener("keyup", function (e) {
|
||||
delete keysDown[e.keyCode]; //Remove key from array
|
||||
}, false);
|
||||
|
||||
// Methods for making requests
|
||||
function safeRequest(method, url, payload, callback, lock=true, force=false) {
|
||||
if (force == true) {
|
||||
allowRequest = true;
|
||||
}
|
||||
else {
|
||||
allowRequest = !(requestLock);
|
||||
}
|
||||
if (allowRequest == true) {
|
||||
var xhr = new XMLHttpRequest(); // new HttpRequest instance
|
||||
xhr.open(method, url);
|
||||
|
||||
if (lock == true) { // If request is using the lock
|
||||
requestLock = true; // Hold the lock
|
||||
}
|
||||
|
||||
xhr.onload = function (e) {
|
||||
if (xhr.readyState === 4) {
|
||||
if (lock == true) { // If request is using the lock
|
||||
requestLock = false; // Release the lock
|
||||
}
|
||||
|
||||
if (xhr.status !== 200) {
|
||||
console.error(xhr.statusText);
|
||||
}
|
||||
callback(JSON.parse(xhr.responseText), xhr.status);
|
||||
}
|
||||
};
|
||||
|
||||
if (method == "POST" || method == "PUT") {
|
||||
xhr.setRequestHeader("Content-Type", "application/json;charset=UTF-8");
|
||||
}
|
||||
|
||||
xhr.send(JSON.stringify(payload));
|
||||
|
||||
}
|
||||
else {
|
||||
console.log("Cannot start the following request while the previous requets is pending:")
|
||||
console.log(method, url, payload)
|
||||
}
|
||||
}
|
||||
132
static/style.css
Normal file
132
static/style.css
Normal file
|
|
@ -0,0 +1,132 @@
|
|||
body {
|
||||
margin: 0;
|
||||
overflow: hidden;
|
||||
font-family: sans-serif;
|
||||
font-size: 14px;
|
||||
}
|
||||
|
||||
* {
|
||||
box-sizing: border-box;
|
||||
}
|
||||
|
||||
/* Preview sizing */
|
||||
.middle img {
|
||||
width: 100%;
|
||||
height: 100%;
|
||||
object-fit: contain
|
||||
}
|
||||
|
||||
/* Create columns that float next to each other */
|
||||
.column {
|
||||
padding: 10px;
|
||||
height: 100%;
|
||||
}
|
||||
|
||||
.left, .right {
|
||||
background-color: #f4f4f4;
|
||||
overflow-y: scroll;
|
||||
flex: 0;
|
||||
flex-shrink: 0;
|
||||
flex-basis: 250px;
|
||||
-webkit-transition: all 0.2s ease-in-out;
|
||||
transition: all 0.2s ease-in-out;
|
||||
}
|
||||
|
||||
.left{
|
||||
float: left;
|
||||
}
|
||||
|
||||
.right{
|
||||
float: right;
|
||||
}
|
||||
|
||||
.hidden{
|
||||
flex-basis: 0;
|
||||
padding:0
|
||||
}
|
||||
|
||||
.middle {
|
||||
position: relative;
|
||||
flex-grow: 1;
|
||||
background-color: #d3d3d3;
|
||||
}
|
||||
|
||||
#left-sb-btn {
|
||||
left: 20px;
|
||||
}
|
||||
|
||||
#right-sb-btn {
|
||||
right: 20px;
|
||||
}
|
||||
|
||||
.sb-btn {
|
||||
top: 20px;
|
||||
position: absolute;
|
||||
}
|
||||
|
||||
.sb-btn button{
|
||||
width: 40px;
|
||||
height: 40px;
|
||||
margin: 0;
|
||||
padding:5px;
|
||||
}
|
||||
|
||||
/* Clear floats after the columns */
|
||||
.row{
|
||||
display: flex;
|
||||
}
|
||||
|
||||
/* Flexboxes */
|
||||
.flexbox {
|
||||
display: flex;
|
||||
margin-bottom: 5px;
|
||||
}
|
||||
|
||||
.flexgrow {
|
||||
flex-grow: 1;
|
||||
}
|
||||
|
||||
/* Data divs */
|
||||
|
||||
#captures {
|
||||
font-size:12px;
|
||||
margin-top: 20px;
|
||||
}
|
||||
|
||||
.capture {
|
||||
height: 75px;
|
||||
width: 240px;
|
||||
margin-bottom: 5px;
|
||||
background-color: #d3d3d3;
|
||||
display: flex;
|
||||
}
|
||||
|
||||
.capture-thumb {
|
||||
width: 80px;
|
||||
height: 75px;
|
||||
}
|
||||
|
||||
.capture-heading {
|
||||
font-weight: bold;
|
||||
margin: 5px 0 5px 0;
|
||||
display: inline-block;
|
||||
}
|
||||
|
||||
.capture-actions {
|
||||
white-space: nowrap;
|
||||
overflow: hidden;
|
||||
text-overflow: ellipsis;
|
||||
margin-left: 5px;
|
||||
}
|
||||
|
||||
.capture img {
|
||||
width: 100%;
|
||||
height: 100%;
|
||||
object-fit: cover;
|
||||
}
|
||||
|
||||
.capture-button {
|
||||
width: 75px;
|
||||
margin-bottom: 3px;
|
||||
height: 22px;
|
||||
}
|
||||
Loading…
Add table
Add a link
Reference in a new issue