Apply 5 suggestion(s) to 2 file(s)
Co-authored-by: Julian Stirling <julian@julianstirling.co.uk>
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c18667c973
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2 changed files with 21 additions and 15 deletions
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@ -263,12 +263,10 @@ def test_example_smart_spiral():
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"lobed",
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"lobed",
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"core",
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"core",
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]
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]
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for sample_type in example_samples:
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for sample_name in example_samples:
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_, planner = scan_test_helpers.example_smart_spiral(sample=sample_type)
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_, planner = scan_test_helpers.example_smart_spiral(sample_name)
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expected_planner = (
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expected_planner = (
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scan_test_helpers.get_expected_result_for_example_smart_spiral(
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scan_test_helpers.get_expected_result_for_example_smart_spiral(sample_name)
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sample=sample_type
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)
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)
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)
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assert planner.path_history == expected_planner.path_history
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assert planner.path_history == expected_planner.path_history
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assert planner.imaged_locations == expected_planner.imaged_locations
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assert planner.imaged_locations == expected_planner.imaged_locations
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@ -112,13 +112,13 @@ def interp_closed_path(xy_points: list[tuple[int, int]], n_points: int) -> MatPa
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def example_smart_spiral(
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def example_smart_spiral(
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sample: str = "lobed",
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sample_name: str = "lobed",
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) -> tuple[FakeSample, scan_planners.ScanPlanner]:
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) -> tuple[FakeSample, scan_planners.ScanPlanner]:
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"""
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"""
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Run an example scan and return the sample scanned and the planner object
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Run an example scan and return the sample scanned and the planner object
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after scan is complete
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after scan is complete
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"""
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"""
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xy_sample_points = load_sample_points(sample=sample)
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xy_sample_points = load_sample_points(sample_name)
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sample = FakeSample(xy_sample_points)
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sample = FakeSample(xy_sample_points)
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img_size = (1000, 1000)
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img_size = (1000, 1000)
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intial_position = (0, 0)
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intial_position = (0, 0)
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@ -162,7 +162,7 @@ def profile_and_save_plot_for_example_smart_spiral():
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run_stats.print_stats("scan_planners.py")
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run_stats.print_stats("scan_planners.py")
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def update_example_smart_spiral_pickle(sample: str):
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def update_example_smart_spiral_pickle(sample_name: str):
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"""
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"""
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Pickle the ScanPlanner for the example_smart_spiral(),
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Pickle the ScanPlanner for the example_smart_spiral(),
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this is done so the history can be compared by testing to check
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this is done so the history can be compared by testing to check
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@ -174,25 +174,28 @@ def update_example_smart_spiral_pickle(sample: str):
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Takes sample, the sample type we have generated, so we can make a
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Takes sample, the sample type we have generated, so we can make a
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pickle for each sample type
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pickle for each sample type
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"""
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"""
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pkl_fname = os.path.join(THIS_DIR, f"example_smart_spiral_{sample}.pkl")
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pkl_fname = os.path.join(THIS_DIR, f"example_smart_spiral_{sample_name}.pkl")
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with open(pkl_fname, "wb") as pkl_file_obj:
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with open(pkl_fname, "wb") as pkl_file_obj:
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_, planner = example_smart_spiral(sample=sample)
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_, planner = example_smart_spiral(sample_name)
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pickle.dump(planner, pkl_file_obj, pickle.HIGHEST_PROTOCOL)
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pickle.dump(planner, pkl_file_obj, pickle.HIGHEST_PROTOCOL)
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def get_expected_result_for_example_smart_spiral(sample: str):
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def get_expected_result_for_example_smart_spiral(sample_name: str) -> ScanPlanner:
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"""
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"""
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Return the expected ScanPlanner object for the example_smart_spiral(),
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Return the expected ScanPlanner object for the example_smart_spiral(),
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this is pickled, so that it can be committed.
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this is pickled, so that it can be committed.
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"""
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"""
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pkl_fname = os.path.join(THIS_DIR, f"example_smart_spiral_{sample}.pkl")
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pkl_fname = os.path.join(THIS_DIR, f"example_smart_spiral_{sample_name}.pkl")
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with open(pkl_fname, "rb") as pkl_file_obj:
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with open(pkl_fname, "rb") as pkl_file_obj:
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planner = pickle.load(pkl_file_obj)
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planner = pickle.load(pkl_file_obj)
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return planner
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return planner
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def load_sample_points(sample: str):
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def load_sample_points(sample_name: str):
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"""Returns the points to generate a FakeSample of sample type "sample" """
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"""Return the points to generate the FakeSample corresponding to the given input name
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Options are "lobed", "regular", and "core".
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"""
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sample_options = {
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sample_options = {
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"lobed": [
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"lobed": [
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(-5000, -5000),
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(-5000, -5000),
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@ -216,7 +219,12 @@ def load_sample_points(sample: str):
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(1000, 0),
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(1000, 0),
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],
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],
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}
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}
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return sample_options[sample]
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if sample_name not in sample_options:
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all_samples = ", ".join(sample_options.keys())
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raise ValueError(
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f"{sample_name} is not a valid sample name. Valid names : {all_samples}"
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)
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return sample_options[sample_name]
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if __name__ == "__main__":
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if __name__ == "__main__":
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