Update select_nearby_focus_site to use moves between

This commit is contained in:
Julian Stirling 2026-02-11 09:53:44 +00:00
parent 9e477a26d8
commit 86fa48fb9b

View file

@ -197,7 +197,12 @@ class ScanPlanner:
return [loc.xyz_tuple for loc in self._path_history if loc.imaged]
@property
def focused_locations(self) -> XYZPosList:
def focused_locations(self) -> list[VisitedScanLocation]:
"""Property to access a copy of the focused_locations."""
return [loc for loc in self._path_history if loc.focused]
@property
def focused_locations_xyz(self) -> XYZPosList:
"""Property to access a copy of the focused_locations."""
return [loc.xyz_tuple for loc in self._path_history if loc.focused]
@ -331,8 +336,8 @@ class RectGridPlanner(ScanPlanner):
def moves_between(
self,
starting_pos: XYPos | np.ndarray | FutureScanLocation,
ending_pos: XYPos | np.ndarray | FutureScanLocation,
starting_pos: XYPos | np.ndarray | FutureScanLocation | VisitedScanLocation,
ending_pos: XYPos | np.ndarray | FutureScanLocation | VisitedScanLocation,
) -> float:
"""Return the larger of x moves or y moves between two xy positions.
@ -340,9 +345,9 @@ class RectGridPlanner(ScanPlanner):
:param ending_pos: the position to measure to
"""
if isinstance(starting_pos, FutureScanLocation):
if isinstance(starting_pos, (FutureScanLocation, VisitedScanLocation)):
starting_pos = starting_pos.xy_tuple
if isinstance(ending_pos, FutureScanLocation):
if isinstance(ending_pos, (FutureScanLocation, VisitedScanLocation)):
ending_pos = ending_pos.xy_tuple
move_size = np.array([self._dx, self._dy])
@ -378,20 +383,18 @@ class RectGridPlanner(ScanPlanner):
if not focused_locations:
return None
next_pos_arr = np.array(next_position, dtype="float64")
path_arr = np.array(focused_locations, dtype="float64")[:, :2]
def sort_key(pos: VisitedScanLocation) -> float:
return self.moves_between(next_position, pos)
# Find all focused positions within dx and dy of next_position.
# Don't just use _adjacent_positions as some grids might have intermediate sites.
dx_ok = np.abs(path_arr[:, 0] - next_pos_arr[0]) <= self._dx
dy_ok = np.abs(path_arr[:, 1] - next_pos_arr[1]) <= self._dy
nearby_indices = np.where(dx_ok & dy_ok)[0]
if len(nearby_indices) == 0:
return None
# Sort by negative number of moves between so smallest moves are at the end.
# The most recent once should be the last point of multiple have the same
# number of moves.
nearby_focus_locations = sorted(
focused_locations, key=lambda p: -self.moves_between(next_position, p)
)
# Pick the most recent nearby site
return focused_locations[nearby_indices[-1]]
return nearby_focus_locations[-1].xyz_tuple
class SmartSpiral(RectGridPlanner):
@ -568,7 +571,7 @@ class SmartSpiral(RectGridPlanner):
Returns None if no focused locations are present
"""
# save to variable rather than search for focussed sites each time.
focused_locations = self.focused_locations
focused_locations = self.focused_locations_xyz
if not focused_locations:
return None