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Stop smart stack infinietly looping

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This commit is contained in:
Julian Stirling 2025-06-27 01:11:55 +01:00
parent e90ff73499
commit 73e54b802b
3 changed files with 35 additions and 20 deletions
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10
src/openflexure_microscope_server/things/smart_scan.py
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@ -653,20 +653,16 @@ class SmartScanThing(Thing):
self._scan_logger.info(msg)
continue
focused_height = self._autofocus.run_smart_stack(
focused, focused_height = self._autofocus.run_smart_stack(
images_dir=self._ongoing_scan_images_dir,
autofocus_dz=self._scan_data["autofocus_dz"],
save_resolution=self._scan_data["save_resolution"],
)
current_pos_xyz = (
new_pos_xyz[0],
new_pos_xyz[1],
focused_height,
)
current_pos_xyz = (new_pos_xyz[0], new_pos_xyz[1], focused_height)
route_planner.mark_location_visited(
current_pos_xyz, imaged=True, focused=True
current_pos_xyz, imaged=True, focused=focused
)
# increment capure counter as thread has completed