Illumination Things for sangaboard and simulator

src/openflexure_microscope_server/things/camera/simulation.py

@@ -140,6 +140,7 @@ class SimulatedCamera(BaseCamera):
         self._capture_thread: Optional[Thread] = None
         self._capture_enabled = False
         self.generate_sprites()
+        self.mult = 1
 
     repeating: bool = lt.property(default=False)
 
@@ -339,14 +340,20 @@ class SimulatedCamera(BaseCamera):
         pl_img = Image.fromarray(np_img.astype("uint8"))
         return pl_img.resize((self.shape[1], self.shape[0]), Image.Resampling.BILINEAR)
 
+    @lt.action
+    def set_led(self, led_on: bool = True, led_channel=None):
+        if led_on:
+            self.mult = 1
+        else:
+            self.mult = 0
+
+
     def generate_frame(self) -> Image.Image:
         """Generate a frame with blobs based on the stage coordinates."""
         pos = self._stage.instantaneous_position
         frame = self.generate_image((pos["y"], pos["x"], pos["z"]))
         # Simulate LED turning off by setting all channels to 0
-        if not self._stage.led_on:
+        return frame * self.mult
-            frame = np.full((self.shape[0], self.shape[1], 3), 0, dtype=np.uint8)
-        return frame
 
     def __enter__(self) -> Self:
         """Start the capture thread when the Thing context manager is opened."""

src/openflexure_microscope_server/things/illumination.py

@@ -3,19 +3,12 @@ from typing import Literal
 
 import labthings_fastapi as lt
 
+from .stage import BaseStage
+from .camera import BaseCam
 
 class Illumination(lt.Thing):
     """Abstract illumination controller."""
 
-    brightness: float = lt.property(
-        default=0.0,
-        description="Illumination brightness (0-1)",
-    )
-
-    @lt.action
-    def set_brightness(self, brightness: float) -> None:
-        self.brightness = brightness
-
     @lt.action
     def flash(
         self,
@@ -23,22 +16,14 @@ class Illumination(lt.Thing):
         dt: float = 0.5,
     ) -> None:
         """Flash the illumination source."""
-        for _ in range(number_of_flashes):
+        raise NotImplementedError(
-            self.set_brightness(1.0)
+            'Flashing the LED can only be done from the simulator or sangaboard'
-            time.sleep(dt)
+        )
-            self.set_brightness(0.0)
-            time.sleep(dt)
-
 
 class SangaIllumination(Illumination):
     """Illumination driven by a Sangaboard."""
 
-    sangaboard = lt.thing_slot(description="Sangaboard providing LED control")
+    _stage: BaseStage = lt.thing_slot()
-
-    @lt.action
-    def set_brightness(self, brightness: float) -> None:
-        self.sangaboard.set_led_brightness(brightness)
-        self.brightness = brightness
 
     @lt.action
     def flash(
@@ -48,7 +33,25 @@ class SangaIllumination(Illumination):
         led_channel: Literal["cc"] = "cc",
     ) -> None:
         for _ in range(number_of_flashes):
-            self.sangaboard.set_led(True, led_channel)
+            self._stage.set_led(False, led_channel)
             time.sleep(dt)
-            self.sangaboard.set_led(False, led_channel)
+            self._stage.set_led(True, led_channel)
+            time.sleep(dt)
+
+class SimulatorIllumination(Illumination):
+    """Illumination control in the simulator."""
+
+    _cam: BaseCam = lt.thing_slot()
+
+    @lt.action
+    def flash(
+        self,
+        number_of_flashes: int = 10,
+        dt: float = 0.5,
+        led_channel: Literal["cc"] = "cc",
+    ) -> None:
+        for _ in range(number_of_flashes):
+            self._cam.set_led(False, led_channel)
+            time.sleep(dt)
+            self._cam.set_led(True, led_channel)
             time.sleep(dt)

src/openflexure_microscope_server/things/stage/sangaboard.py

@@ -6,7 +6,7 @@ import threading
 from contextlib import contextmanager
 from copy import copy
 from types import TracebackType
-from typing import Any, Iterator, Optional, Self
+from typing import Any, Iterator, Literal, Optional, Self
 
 import semver
 
@@ -172,3 +172,31 @@ class SangaboardThing(BaseStage):
         with self.sangaboard() as sb:
             sb.zero_position()
         self.update_position()
+
+    @lt.action
+    def set_led(
+        self,
+        led_on: bool = True,
+        led_channel: Literal["cc"] = "cc",
+    ) -> None:
+        """Flash the LED to identify the board.
+
+        This is intended to be useful in situations where there are multiple
+        Sangaboards in use, and it is necessary to identify which one is
+        being addressed.
+        """
+        led_command = f"led_{led_channel}"
+        with self.sangaboard() as sb:
+            return_value = sb.query(f"{led_command}?")
+            if not return_value.startswith("CC LED:"):
+                raise IOError("The sangaboard does not support LED control")
+
+            # Reading and setting LED brightness suffers from repeated reads and writes
+            # decreasing the value. Rather than use the value the code warns that the value
+            # cannot be used.
+            if led_on:
+                on_brightness = 0.32
+                sb.query(f"{led_command} {on_brightness}")
+            else:    
+                sb.query(f"{led_command} 0")
+