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Update version for alpha 4 release and update changelog

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Julian Stirling 2025-12-08 14:58:27 +00:00
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CHANGELOG.md
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# [v3.0.0-alpha4](https://gitlab.com/openflexure/openflexure-microscope-server/compare/v3.0.0-alpha3...v3.0.0-alpha4) (2025-12-15)
The fourth alpha release of the server. This release has concentrated on colour reproduction, scanning, and the structure of the web-app.
* Improved PiCamera tuning and colour reproduction
* Algorithm for white-balance calculation improved. Images are grey not yellow.
* Improved colour correction matrices
* Ship our own custom picamera Tuning files, and improve handling of updating this data
* Add contrast and brightness sliders into scan viewer.
* Scanning improvements
* Capture extra images on the boundary between sample and background to robustly capture the edges of the sample
* Add new default background detect method that works on localised image variation not global colour
* Add extra checks into smart stack for checking if stack is successful
* Stage measuring
* Automatic range of motion measurements - Not yet exposed in UI
* A new recentre algorithm - Not yet exposed in UI
* Improvements to the webapp
* Significant modernisation of the webapp build system
* UI customises to available Things - This allows different configurations such as manual microscopes with no stage!
* Overhaul of the code that runs the Calibration Wizard. This will make it easier to add new calibration steps in future
* Add pagination to scan list
The following merge requests have been merged into v3:
* !404 Fix jitter at specific screen sizes during scan
* !406 Strip new lines when logging stitching
* !411 Improve smart spiral scan planner to better capture the edge of scamples
* !414 Set colour correction to interpolate value
* !409 Colour sliders in seadragon viewer
* !413 Fix sync button to emit click on click event.
* !408 Scan tab show scan duration
* !416 Add section to Picamera tests README on keeping branches up to date
* !412 Camera metadata with basic data
* !335 Adding automatic range of motion measurements
* !415 Refactor Calibration Wizard
* !419 Improve simulation frame rate
* !420 Specify config patches rather than full config files in settings
* !417 Set Colour Gains from lens shading tables
* !422 Enable JS formatting checks in CI, reformat to match
* !425 Stricter rules on pytest.raises, requiring match for generic error types
* !424 De-duplicate HTML for tab content, add way for tab to request scroll to top
* !421 Add pagination to scan list
* !418 Update the picamera tuning file utilities to not modify the dictionaries in place
* !428 Split up the action button methods for monitoring and starting a task
* !430 Local storage in store
* !431 Update js toolchain
* !426 Stop reading scan_data.json for ongoing scan.
* !433 Skip buttons on calibration wizard
* !436 A matrix display component with copy button that copys as code. <!-- codespell:ignore copys -->
* !410 Ship our own default tuning files
* !435 UI customises to available Things
* !429 Recentre using RangeOfMotionThing methods
* !440 Resolve "Release Checklist"
* !437 Consolidate action buton to just a button <!-- codespell:ignore buton -->
* !439 Configuration for manual microscope
* !444 Visit secondary locations first
* !447 Log an error if the sangaboard firmware is below v1.0.4
* !434 Improve the stability of scanning
* !438 Formalise import sorting rules and enforce
* !448 Bump required stitching version to 0.2.1
# [v3.0.0-alpha3](https://gitlab.com/openflexure/openflexure-microscope-server/compare/v3.0.0-alpha2...v3.0.0-alpha3) (2025-10-10)
The third alpha release of the server. The focus has been on stability and documentation. Some highlights are:
@ -57,6 +119,7 @@ The following merge requests have been merged into v3:
* !400 Verify stack params at start of scan main loop
* !403 Ce disable
* !390 Improve documentation for simulation server
* !405 Bump version for alpha3 and update changelog
# [v3.0.0-alpha2](https://gitlab.com/openflexure/openflexure-microscope-server/compare/v3.0.0-alpha1...v3.0.0-alpha2) (2025-08-08)