Added initial calibration modal wizard
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8 changed files with 514 additions and 101 deletions
270
src/components/modalComponents/calibrationModal.vue
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270
src/components/modalComponents/calibrationModal.vue
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<template>
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<div id="modal-example" ref="calibrationModalEl" uk-modal>
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<div v-if="ready" class="uk-modal-dialog uk-modal-body">
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<h2 class="uk-modal-title">Microscope Calibration</h2>
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<div v-show="stepValue == 0">
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<p>
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<b
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>Some important microscope calibration data is currently missing.</b
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>
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</p>
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<p>
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Your microscope will still function, however some functionality will
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be limited, and image quality will likely suffer.
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</p>
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<p>
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<b>Click Next to begin microscope calibration.</b>
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</p>
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</div>
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<div v-show="stepValue == 1">
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<h3>Lens-shading</h3>
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<div v-if="isLSTCalibrated">
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<p>
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<b
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>Your lens-shading table has already been calibrated. Click Next
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to move on.</b
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>
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</p>
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</div>
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<div v-else>
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<p>
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<b
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>Follow the important steps below before starting lens-shading
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calibration!</b
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>
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</p>
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<ul class="uk-list uk-list-bullet">
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<li>Remove any samples from your microscope</li>
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<li>Ensure your illumination is on and properly fixed in place</li>
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</ul>
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<miniStreamDisplay
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v-if="stepValue == 1"
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class="mini-preview"
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></miniStreamDisplay>
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<p>Once you're ready, click auto-calibrate.</p>
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<cameraCalibrationSettings
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:show-extra-settings="false"
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></cameraCalibrationSettings>
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</div>
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</div>
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<div v-show="stepValue == 2">
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<h3>Camera-stage mapping</h3>
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<div v-if="isCSMCalibrated">
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<p>
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<b
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>Your camera-stage mapping has already been calibrated. Click Next
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to move on.</b
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>
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</p>
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</div>
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<div v-else>
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<p>
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<b
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>Follow the important steps below before starting camera-stage
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mapping calibration!</b
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>
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</p>
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<ul class="uk-list uk-list-bullet">
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<li>Insert a clearly visible sample to the microscope</li>
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<li>
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Ensure the sample is reasonably well centered on the microscope
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camera
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</li>
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</ul>
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<miniStreamDisplay
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v-if="stepValue == 2"
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class="mini-preview"
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></miniStreamDisplay>
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<p>Once you're ready, click auto-calibrate.</p>
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<cameraStageMappingSettings
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:show-extra-settings="false"
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></cameraStageMappingSettings>
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</div>
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</div>
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<div v-show="stepValue == 3">
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<p>
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<b>Calibration complete</b>
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</p>
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<p>
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Click Finish to return to your microscope, or Restart to re-run the
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calibration routine
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</p>
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</div>
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<p class="uk-text-right">
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<button
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v-show="stepValue == 0"
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class="uk-button uk-button-default uk-modal-close"
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type="button"
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>
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Cancel
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</button>
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<button
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v-show="stepValue == 3"
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class="uk-button uk-button-default"
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type="button"
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@click="stepValue = 0"
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>
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Restart
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</button>
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<button
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v-show="stepValue < 3"
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class="uk-button uk-button-primary uk-margin-left"
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type="button"
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@click="increment()"
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>
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Next
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</button>
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<button
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v-show="stepValue == 3"
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class="uk-button uk-button-primary uk-margin-left"
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type="button"
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@click="hide()"
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>
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Finish
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</button>
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</p>
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</div>
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</div>
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</template>
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<script>
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import axios from "axios";
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import cameraCalibrationSettings from "../viewComponents/settingsComponents/cameraCalibrationSettings.vue";
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import cameraStageMappingSettings from "../viewComponents/settingsComponents/cameraStageMappingSettings.vue";
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import miniStreamDisplay from "../viewComponents/miniStreamDisplay.vue";
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export default {
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name: "CalibrationModal",
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components: {
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cameraCalibrationSettings,
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cameraStageMappingSettings,
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miniStreamDisplay
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},
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props: {
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availablePlugins: {
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type: Array,
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required: true
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}
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},
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data: function() {
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return {
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ready: false,
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stepValue: 0,
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settings: {}
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};
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},
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computed: {
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settingsUri: function() {
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return `${this.$store.getters.baseUri}/api/v2/instrument/settings`;
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},
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availablePluginTitles: function() {
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return this.availablePlugins.map(a => a.title);
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},
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isCSMCalibrated: function() {
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if (this.settings.extensions["org.openflexure.camera_stage_mapping"]) {
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return true;
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} else {
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return false;
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}
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},
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isLSTCalibrated: function() {
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if (
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this.settings.camera.picamera &&
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this.settings.camera.picamera.lens_shading_table
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) {
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return true;
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} else {
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return false;
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}
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},
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canCSMCalibrated: function() {
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return this.availablePluginTitles.includes(
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"org.openflexure.camera_stage_mapping"
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);
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},
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canLSTCalibrated: function() {
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return this.availablePluginTitles.includes(
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"org.openflexure.calibration.picamera"
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);
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},
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isUseful: function() {
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var CSMUseful = this.canCSMCalibrated && !this.isCSMCalibrated;
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var LSTUseful = this.canLSTCalibrated && !this.isLSTCalibrated;
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return CSMUseful || LSTUseful;
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}
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},
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methods: {
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show: function() {
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// Get current settings
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this.getSettings().then(() => {
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// Check if this calibration wizard can actually do anything useful
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console.log(this.isUseful);
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if (this.isUseful) {
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this.ready = true;
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this.stepValue = 0;
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// Show the modal
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var el = this.$refs["calibrationModalEl"];
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this.showModalElement(el); // Calls the mixin
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}
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});
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},
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hide: function() {
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// Show the modal
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var el = this.$refs["calibrationModalEl"];
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this.hideModalElement(el); // Calls the mixin
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this.ready = false;
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},
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getSettings: function() {
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return axios
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.get(this.settingsUri)
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.then(response => {
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this.settings = response.data;
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})
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.catch(error => {
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this.modalError(error); // Let mixin handle error
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});
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},
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decrement: function() {
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if (this.stepValue > 0) {
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this.stepValue = this.stepValue - 1;
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}
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},
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increment: function() {
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// Upper bound on section number
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if (this.stepValue < 3) {
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this.stepValue = this.stepValue + 1;
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return true;
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}
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}
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}
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};
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</script>
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<style scoped>
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.mini-preview {
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width: 75%;
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margin-left: auto;
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margin-right: auto;
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border: 1px solid #555;
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}
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</style>
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