Add unit tests for RelativeDataPath and save_from_memory
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4 changed files with 199 additions and 2 deletions
128
tests/unit_tests/test_ofm_thing.py
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128
tests/unit_tests/test_ofm_thing.py
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"""Tests for the for thing defined in the base __init__ of the things dir."""
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import os
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from tempfile import TemporaryDirectory
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import pytest
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from pydantic import ValidationError
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from labthings_fastapi.testing import create_thing_without_server
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from openflexure_microscope_server.things import OFMThing, RelativeDataPath
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@pytest.mark.parametrize(
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("path", "valid"),
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[
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("foo.png", True),
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("foo/bar/", True),
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("./foo/bar", True),
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("/foo/bar", False),
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("../foo/bar", False),
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("foo/../bar", False),
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],
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)
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def test_rel_data_path_validation(path, valid):
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"""Check validation for a number of cases."""
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if valid:
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path_obj = RelativeDataPath(path)
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assert path_obj.root == os.path.normpath(path)
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else:
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with pytest.raises(ValidationError):
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RelativeDataPath(path)
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def test_setting_saving_things():
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"""Check that the saving thing can be set."""
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thing1 = create_thing_without_server(OFMThing)
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thing1._data_dir = os.path.join("data", "thing1")
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thing2 = create_thing_without_server(OFMThing)
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thing2._data_dir = os.path.join("data", "thing2")
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path = RelativeDataPath("foo.png")
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assert not path.save_location_set
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with pytest.raises(
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RuntimeError, match="The saving Thing for the relative path was never set"
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):
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path.abs_data_path
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# Set the saving thing and check the response is as expected
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path.set_saving_thing(thing1)
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assert path.save_location_set
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assert path.abs_data_path == os.path.join("data", "thing1", "foo.png")
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assert path._saving_thing is thing1
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# Check there is an error is trying to overwrite it with a new thing...
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with pytest.raises(
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RuntimeError, match="The saving Thing for the relative path is already set"
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):
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path.set_saving_thing(thing2)
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# or a temporary dir
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with pytest.raises(
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RuntimeError, match="The saving Thing for the relative path is already set"
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):
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path.save_to_tempdir()
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# Check no error when using set_saving_thing_if_unset
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path.set_saving_thing_if_unset(thing2)
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assert path.save_location_set
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assert path.abs_data_path == os.path.join("data", "thing1", "foo.png")
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assert path._saving_thing is thing1
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# Check set_saving_thing_if_unset works on a new path.
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path2 = RelativeDataPath("foo2.png")
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assert not path2.save_location_set
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path2.set_saving_thing_if_unset(thing2)
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assert path2.save_location_set
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assert path2.abs_data_path == os.path.join("data", "thing2", "foo2.png")
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assert path2._saving_thing is thing2
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def test_saving_thing_propagates_on_join():
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"""Check when joining to a path the saving thing propagates to the new path."""
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thing = create_thing_without_server(OFMThing)
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thing._data_dir = os.path.join("data", "thing")
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path = RelativeDataPath("foo")
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# No thing set
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assert not path.save_location_set
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# After joining no thing set
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path2 = path.join("bar")
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assert not path2.save_location_set
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# Set thing and check joiend path is as expected
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path2.set_saving_thing(thing)
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assert path2.save_location_set
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assert path2.abs_data_path == os.path.join("data", "thing", "foo", "bar")
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# Do another join. Set thing remains
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path3 = path2.join("file.png")
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assert path3.save_location_set
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assert path3.abs_data_path == os.path.join(
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"data", "thing", "foo", "bar", "file.png"
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)
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def test_temp_dir_for_saving_thing():
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"""Check that the saving thing can actually be a temporary directory."""
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path = RelativeDataPath("foo.png")
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tmpdir = path.save_to_tempdir()
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assert isinstance(tmpdir, TemporaryDirectory)
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assert path.save_location_set
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assert path.abs_data_path == os.path.join(tmpdir.name, "foo.png")
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def test_create_data_path_from_thing():
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"""Check the create_data_path method of ``OFMThing``.
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It should create a RelativeDataPath with itself set as the saving thing.
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"""
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thing = create_thing_without_server(OFMThing)
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thing._data_dir = os.path.join("data", "thing")
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path = thing.create_data_path("file.png")
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assert path.save_location_set
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assert path.abs_data_path == os.path.join("data", "thing", "file.png")
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assert path._saving_thing is thing
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