Send scan duration as a number (or null) from backend. Format in UI
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16687b5252
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04d3162091
2 changed files with 63 additions and 22 deletions
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@ -8,12 +8,21 @@ import zipfile
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import threading
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import threading
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import json
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import json
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from datetime import datetime, timedelta
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from datetime import datetime, timedelta
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import logging
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from pydantic import BaseModel, field_validator, field_serializer, ConfigDict
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from pydantic import (
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BaseModel,
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field_validator,
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field_serializer,
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ConfigDict,
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ValidationError,
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)
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from openflexure_microscope_server.utilities import requires_lock
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from openflexure_microscope_server.utilities import requires_lock
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from openflexure_microscope_server.utilities import make_name_safe
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from openflexure_microscope_server.utilities import make_name_safe
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LOGGER = logging.getLogger(__name__)
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IMG_DIR_NAME = "images"
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IMG_DIR_NAME = "images"
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SCAN_ZERO_PAD_DIGITS = 4
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SCAN_ZERO_PAD_DIGITS = 4
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@ -28,11 +37,12 @@ class NotEnoughFreeSpaceError(IOError):
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class ScanInfo(BaseModel):
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class ScanInfo(BaseModel):
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"""Summary information about a scan folder."""
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"""Summary information for the UI about a scan folder."""
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name: str
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name: str
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created: float
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created: float
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modified: float
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modified: float
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duration: Optional[float]
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number_of_images: int
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number_of_images: int
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stitch_available: bool
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stitch_available: bool
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dzi: Optional[str]
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dzi: Optional[str]
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@ -257,14 +267,7 @@ class ScanDirectoryManager:
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This is a dictionary not a base model as the data format has changed
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This is a dictionary not a base model as the data format has changed
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somewhat over time.
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somewhat over time.
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"""
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"""
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json_fpath = self.get_scan_data_path(scan_name)
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return ScanDirectory(scan_name, self.base_dir).get_scan_data_dict()
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if json_fpath is None:
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return None
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try:
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with open(json_fpath, "r", encoding="utf-8") as data_file:
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return json.load(data_file)
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except (json.decoder.JSONDecodeError, IOError):
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return None
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@property
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@property
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@requires_lock
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@requires_lock
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@ -469,8 +472,40 @@ class ScanDirectory:
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"""Return the modified time of the directory."""
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"""Return the modified time of the directory."""
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return max(os.stat(root).st_mtime for root, _, _ in os.walk(self.dir_path))
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return max(os.stat(root).st_mtime for root, _, _ in os.walk(self.dir_path))
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def get_scan_data_dict(self) -> Optional[dict[str, Any]]:
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"""Return the scan data from the json file as a dictionary.
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This is safer than get_scan_data for older scans before a defined model was
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used.
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:return: The data as a dictionary or None if it couldn't be loaded.
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"""
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if self.scan_data_path is None:
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return None
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try:
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with open(self.scan_data_path, "r", encoding="utf-8") as data_file:
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return json.load(data_file)
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except (json.decoder.JSONDecodeError, IOError):
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return None
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def get_scan_data(self) -> Optional[ScanData]:
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"""Return the scan data from the json file as a ScanData model.
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:return: The data as a ScanData model or None if it couldn't be loaded or
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valdiated.
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"""
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data_dict = self.get_scan_data_dict()
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if data_dict is None:
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LOGGER.warning(f"Could not load scan data for {self.name}.")
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return None
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try:
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return ScanData(**data_dict)
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except ValidationError:
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LOGGER.warning(f"Could not validate scan data for {self.name}.")
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return None
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def scan_info(self) -> ScanInfo:
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def scan_info(self) -> ScanInfo:
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"""Return the information for the scan directory as a ScanInfo object."""
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"""Return the information to be used in the UI for the scan."""
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scan_files = self.get_scan_files()
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scan_files = self.get_scan_files()
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scan_images = self._extract_scan_images(scan_files)
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scan_images = self._extract_scan_images(scan_files)
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stitches = self._extract_final_stitches(scan_files)
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stitches = self._extract_final_stitches(scan_files)
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@ -479,10 +514,18 @@ class ScanDirectory:
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stitch_available = len(stitches) > 0
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stitch_available = len(stitches) > 0
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dzi = None if not dzi_files else str(dzi_files[0])
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dzi = None if not dzi_files else str(dzi_files[0])
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scan_data = self.get_scan_data()
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duration = (
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None
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if scan_data is None or scan_data.duration is None
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else scan_data.duration.total_seconds()
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)
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return ScanInfo(
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return ScanInfo(
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name=self.name,
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name=self.name,
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created=self.created_time,
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created=self.created_time,
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modified=self.get_modified_time(),
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modified=self.get_modified_time(),
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duration=duration,
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number_of_images=number_of_images,
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number_of_images=number_of_images,
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stitch_available=stitch_available,
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stitch_available=stitch_available,
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dzi=dzi,
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dzi=dzi,
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@ -130,20 +130,18 @@ export default {
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return `${HH}:${MM} ${dd}/${mm}/${yyyy}`;
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return `${HH}:${MM} ${dd}/${mm}/${yyyy}`;
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},
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},
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formatDuration(duration) {
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formatDuration(duration) {
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const match = duration.match(/PT(?:(\d+)H)?(?:(\d+)M)?(?:(\d+)S)?/);
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if (duration == null || isNaN(duration)) return "Not known";
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if (!match) return "00:00:00";
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const h = Math.floor(duration / 3600);
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const m = Math.floor((duration % 3600) / 60);
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const s = Math.floor(duration % 60);
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const hours = parseInt(match[1] || 0, 10);
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const m_pad = String(m).padStart(2, "0");
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const minutes = parseInt(match[2] || 0, 10);
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const s_pad = String(s).padStart(2, "0");
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const seconds = parseInt(match[3] || 0, 10);
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// Format to HH:MM:SS with leading zeros
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if (h > 0) return `${h}h ${m_pad}m ${s_pad}s`;
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return [
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if (m > 0) return `${m_pad}m ${s_pad}s`;
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String(hours).padStart(2, "0"),
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return `${s_pad}s`;
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String(minutes).padStart(2, "0"),
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String(seconds).padStart(2, "0"),
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].join(":");
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},
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},
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requestViewer() {
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requestViewer() {
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// Notify parent that thumbnail was clicked
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// Notify parent that thumbnail was clicked
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